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Fitness for 5 genes in
Mycobacterium tuberculosis H37Rv
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rv1154c and Rv1155 overlap by 56 nucleotides
Rv1155 and Rv1156 are separated by 433 nucleotides
Rv1156 and Rv1157c are separated by 162 nucleotides
Rv1157c and Rv1158c are separated by 7 nucleotides
Rv1154c: Rv1154c - Hypothetical protein, at 1,280,843 to 1,281,484
Rv1154c
Rv1155: Rv1155 - Possible pyridoxamine 5'-phosphate oxidase (PNP/PMP oxidase) (pyridoxinephosphate oxidase) (PNPOX) (pyridoxine 5'-phosphate oxidase), at 1,281,429 to 1,281,872
Rv1155
Rv1156: Rv1156 - Conserved protein, at 1,282,306 to 1,282,893
Rv1156
Rv1157c: Rv1157c - Conserved ala-, pro-rich protein, at 1,283,056 to 1,284,171
Rv1157c
Rv1158c: Rv1158c - Conserved hypothetical ala-, pro-rich protein, at 1,284,179 to 1,284,862
Rv1158c
Group
Condition
Rv1154c
Rv1155
Rv1156
Rv1157c
Rv1158c
stress
7H9 with copper (II) chloride 0.08 mM
+0.2
+0.1
-0.7
N.D.
-0.8
pH
pH 4.5
-0.2
-0.6
+0.1
N.D.
-0.4
stress
7H9 with Menadione 0.005 mM
-0.1
-1.3
-0.2
N.D.
+0.4
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
-0.0
+0.3
-0.1
N.D.
-1.0
stress
7H9 with nitrate 4 mM
-0.2
-0.1
-0.8
N.D.
+0.3
stress
7H9 with Menadione 0.005 mM
+0.1
-1.5
-0.0
N.D.
+0.8
stress
7H9 with Levofloxacin 0.3 ug/mL
-0.1
+0.4
+0.3
N.D.
-1.2
stress
7H9 with Ethionamide 0.1 ug/mL
-0.3
-0.6
-0.3
N.D.
+1.1
stress
7H9 with Novobiocin 0.004 mM
+0.0
-0.0
-0.8
N.D.
+0.6
stress
7H9 with 2-Mercaptopyridine N-oxide 0.0078 mM
+0.0
-0.5
-0.3
N.D.
+0.9
no stress control
no stress control
-0.1
-0.4
-0.2
N.D.
+0.8
stress
7H9 with 2-bromo-2-nitro-1,3-propanediol 0.1 mM
-0.2
-0.3
-0.1
N.D.
+0.8
no stress control
no stress control
+0.0
-0.3
-0.2
N.D.
+1.0
stress
7H9 with Pretomanid 0.213 ug/mL
+0.1
-0.2
-0.3
N.D.
+0.9
stress
7H9 with Ciprofloxacin Hydrochloride 0.001 mM
-0.1
-0.3
+0.2
N.D.
+0.8
stress
7H9 with Linezolid 0.3 ug/mL
-0.2
+0.3
-0.1
N.D.
+0.8
carbon source
heptadecanoic 250 uM (C)
-0.2
-0.1
-0.1
N.D.
+1.2
stress
7H9 with Pyrazinamide 50 ug/mL; pH 5.5
+0.0
+0.3
-0.3
N.D.
+0.8
stress
7H9 with Benzethonium chloride 0.068 mM
-0.1
+0.1
-0.1
N.D.
+1.2
nitrogen source
L-Alanine 10 mM (N)
+0.2
-0.2
+0.1
N.D.
+1.0
stress
7H9 with Spectinomycin 0.029 mM
+0.2
-0.1
-0.1
N.D.
+1.1
stress
7H9 with Spectinomycin 0.029 mM
+0.2
+0.2
-0.1
N.D.
+0.9
nitrogen source
L-Glutamic 10 mM (N)
+0.2
-0.0
-0.1
N.D.
+1.0
no stress control
no stress control
+0.1
-0.3
+0.1
N.D.
+1.4
stress
7H9 with Ciprofloxacin Hydrochloride 0.0012 mM
+0.2
+0.2
-0.0
N.D.
+1.0
nitrogen source
Glycine 10 mM (N)
+0.0
+0.0
-0.2
N.D.
+1.6
stress
7H9 with Ciprofloxacin Hydrochloride 0.0012 mM
+0.1
+0.1
+0.3
N.D.
+0.9
no stress control
no stress control
+0.1
+0.1
+0.0
N.D.
+1.1
nitrogen source
L-Asparagine 10 mM (N)
+0.2
+0.0
+0.2
N.D.
+1.4
stress
7H9 with Dodecyl Sulfate 0.02 vol%
+0.2
+0.9
-0.3
N.D.
+0.9
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