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Fitness for 5 genes in
Mycobacterium tuberculosis H37Rv
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rv0144 and Rv0145 are separated by 88 nucleotides
Rv0145 and Rv0146 are separated by 42 nucleotides
Rv0146 and Rv0147 are separated by 94 nucleotides
Rv0147 and Rv0148 are separated by 74 nucleotides
Rv0144: Rv0144 - Probable transcriptional regulatory protein (possibly TetR-family), at 170,284 to 171,126
Rv0144
Rv0145: Rv0145 - Possible S-adenosylmethionine-dependent methyltransferase, at 171,215 to 172,168
Rv0145
Rv0146: Rv0146 - Possible S-adenosylmethionine-dependent methyltransferase, at 172,211 to 173,143
Rv0146
Rv0147: Rv0147 - Probable aldehyde dehydrogenase (NAD+) dependent, at 173,238 to 174,758
Rv0147
Rv0148: Rv0148 - Probable short-chain type dehydrogenase/reductase, at 174,833 to 175,693
Rv0148
Group
Condition
Rv0144
Rv0145
Rv0146
Rv0147
Rv0148
stress
7H9 with Moxifloxacin 0.121 ug/mL
-0.0
-0.9
-1.8
-0.0
+0.0
stress
7H9 with Moxifloxacin 0.121 ug/mL
-0.2
-0.4
-2.4
+0.1
+0.2
stress
7H9 with Isoniazid 0.025 ug/mL
+0.0
-0.0
-0.5
-0.2
-0.4
stress
7H9 with Pretomanid 0.213 ug/mL
-0.1
-0.8
-0.1
-0.0
-0.0
stress
7H9 with copper (II) chloride 0.08 mM
-0.1
-0.4
-0.1
-0.1
-0.3
nitrogen source
L-Asparagine 10 mM (N)
-0.2
-0.3
-0.3
+0.2
-0.4
no stress control
no stress control
-0.1
-0.6
-0.1
-0.1
-0.1
stress
7H9 with Ciprofloxacin Hydrochloride 0.001 mM
-0.2
-0.4
-0.2
-0.1
-0.1
stress
7H9 with Linezolid 0.3 ug/mL
-0.0
-0.3
-0.1
-0.1
-0.4
stress
7H9 with 2-Mercaptopyridine N-oxide 0.0078 mM
-0.0
-1.0
-0.3
+0.2
+0.3
stress
7H9 with Hydrogen peroxide 3.97 mM
-0.0
-0.6
+0.2
+0.1
-0.5
stress
7H9 with Linezolid 0.3 ug/mL
+0.0
-0.6
-0.0
-0.1
-0.2
stress
7H9 with 2-Mercaptopyridine N-oxide 0.0078 mM
+0.0
-0.8
-0.2
+0.1
-0.0
stress
7H9 with Amikacin di2 ug/mL
+0.1
-0.2
-0.2
-0.1
-0.3
stress
7H9 with Hydrogen peroxide 3.97 mM
+0.2
-0.4
-0.1
-0.1
-0.3
stress
7H9 with 8-hydroxy-nitroquinoline 0.03 mM
+0.3
-0.9
+0.2
+0.2
-0.2
stress
7H9 with Dodecyl Sulfate 0.02 vol%
+0.2
-0.1
+0.2
-0.2
-0.4
stress
7H9 with Formaldehyde 0.23 mM
-0.0
-0.7
+0.0
-0.1
+0.4
nitrogen source
Urea 10mM (N)
+0.3
-0.4
-0.2
+0.3
-0.3
no stress control
no stress control
+0.0
-0.7
-0.0
+0.0
+0.6
stress
7H9 with hypochlorite 0.4 vol%
+0.1
-0.3
+0.3
+0.0
-0.2
carbon source
Palmitic 100 uM (C)
-0.4
+0.3
-0.1
+0.1
+0.0
stress
7H9 with Linezolid 0.44 ug/mL
+0.1
+0.3
+0.2
-0.2
-0.2
no stress control
no stress control
+0.1
-0.5
+0.2
+0.1
+0.4
stress
7H9 with Vancomycin Hydrochloride from Streptomyces orientalis 0.012 mM
-0.0
-0.2
+0.4
+0.2
-0.1
stress
7H9 with Irgasan 0.065 mM
-0.0
+0.3
+0.3
+0.0
-0.3
carbon source
oleate 200uM (C)
+0.0
+0.6
-0.0
-0.2
+0.2
stress
7H9 with Ethionamide 0.1 ug/mL
+0.2
+0.5
-0.3
+0.3
+0.2
stress
7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
-0.1
-0.0
+0.2
+0.3
+0.4
stress
7H9 with Clofazimine 0.45 ug/mL
+0.2
+0.4
+0.2
+0.0
+0.4
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