Fitness for 5 genes in Ralstonia solanacearum GMI1000

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RS_RS17290	RS_RS17295	RS_RS25840	RS_RS17300	RS_RS17305
carbon source	D-Glucose (C)	-1.0	-0.1	N.D.	+0.0	-0.5
carbon source	L-Aspartic Acid (C)	-0.8	-0.0	N.D.	-0.1	-0.1
carbon source	L-Alanine (C)	-0.7	-0.1	N.D.	-0.1	-0.2
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.7	+0.2	N.D.	-0.1	-0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol	-1.0	-0.1	N.D.	-0.1	+0.2
smsa no antibiotic control	SMSA no antibiotic control	-1.0	-0.1	N.D.	-0.1	+0.2
in planta	Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi	-0.5	+0.2	N.D.	+0.0	-0.5
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.7	+0.0	N.D.	-0.1	-0.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.8	+0.0	N.D.	-0.0	+0.1
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.4	+0.1	N.D.	-0.1	-0.4
in planta	Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.6	-0.2	N.D.	-0.0	+0.1
cpg	CPG	-0.6	-0.2	N.D.	-0.1	+0.1
carbon source	L-Glutamine (C)	-0.5	-0.2	N.D.	-0.1	+0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.5	-0.1	N.D.	-0.0	+0.3
in planta	Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+0.1	+0.2	N.D.	-0.0	-0.6
carbon source	succinate (C)	-0.9	+0.7	N.D.	-0.1	+0.2
smsa no antibiotic control	SMSA no antibiotic control	+0.4	-0.1	N.D.	-0.1	-0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	-0.8	-0.0	N.D.	+0.0	+0.8
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-0.7	+0.0	N.D.	+0.0	+0.6
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-0.7	-0.0	N.D.	-0.0	+0.7
in planta	Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-1.0	+0.1	N.D.	+0.0	+0.9
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.6	+0.1	N.D.	+0.1	+0.4
carbon source	D-Glucose (C)	+0.3	+0.2	N.D.	-0.1	-0.3
in planta	Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.3	+0.2	N.D.	-0.0	+0.5
carbon source	D,L-Malic Acid (C)	+0.6	+0.0	N.D.	-0.1	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	+0.8	-0.1	N.D.	+0.0	-0.2
in planta	Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.1	+0.6	N.D.	-0.0	+0.4
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	+0.1	+0.2	N.D.	+0.2	+0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+1.0	+0.1	N.D.	+0.0	+0.2
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+1.2	+0.1	N.D.	+0.1	+0.5