Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS01220 and RS_RS01225 overlap by 4 nucleotidesRS_RS01225 and RS_RS25280 are separated by 22 nucleotidesRS_RS25280 and RS_RS25285 are separated by 24 nucleotidesRS_RS25285 and RS_RS01235 are separated by 682 nucleotides RS_RS01220: RS_RS01220 - IS21 family transposase ISRso6, at 275,259 to 276,302 _RS01220 RS_RS01225: RS_RS01225 - cell division protein ZapE, at 276,299 to 277,144 _RS01225 RS_RS25280: RS_RS25280 - calcium binding hemolysin protein, at 277,167 to 281,666 _RS25280 RS_RS25285: RS_RS25285 - hypothetical protein, at 281,691 to 282,155 _RS25285 RS_RS01235: RS_RS01235 - IS256 family transposase ISRso7, at 282,838 to 284,088 _RS01235
Group Condition RS_RS01220 RS_RS01225 RS_RS25280 RS_RS25285 RS_RS01235
carbon source L-Aspartic Acid (C) N.D. N.D. -0.2 -2.7 N.D.
carbon source L-Alanine (C) N.D. N.D. -0.2 -2.5 N.D.
carbon source D-Glucose (C) N.D. N.D. -0.1 -2.3 N.D.
carbon source D-Galactose (C) N.D. N.D. -0.1 -2.1 N.D.
carbon source L-Glutamic (C) N.D. N.D. -0.2 -2.0 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. N.D. -0.1 -1.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. +0.1 -1.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. -0.3 -0.6 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. +0.2 -1.1 N.D.
carbon source D-Galactose (C) N.D. N.D. -0.0 -0.8 N.D.
carbon source L-Glutamine (C) N.D. N.D. +0.0 -0.8 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.1 -0.7 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -0.1 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. N.D. -0.1 -0.6 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.1 -0.6 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. +0.4 -1.0 N.D.
m63_quarter_strength M63_quarter_strength N.D. N.D. +0.2 -0.7 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. +0.2 -0.6 N.D.
carbon source L-Glutamine (C) N.D. N.D. -0.3 +0.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. -0.2 +0.5 N.D.
carbon source Sucrose (C) N.D. N.D. -0.3 +0.6 N.D.
carbon source D-Glucose (C) N.D. N.D. -0.1 +0.6 N.D.
survival water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days N.D. N.D. -0.1 +0.6 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. +0.2 +0.6 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. +0.1 +0.8 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. +0.1 +0.8 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. +0.1 +0.9 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. +0.1 +1.2 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. -0.1 +1.4 N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. +0.1 +1.4 N.D.
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