Fitness for 5 genes in Ralstonia solanacearum GMI1000

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 110 experiments or choose conditions or try the comparative fitness browser

500 ntRS_RS25270 and RS_RS01125 are separated by 326 nucleotidesRS_RS01125 and RS_RS25275 are separated by 29 nucleotidesRS_RS25275 and RS_RS01130 overlap by 4 nucleotidesRS_RS01130 and RS_RS01135 are separated by 7 nucleotides RS_RS25270: RS_RS25270 - hypothetical protein, at 250,073 to 250,351 _RS25270 RS_RS01125: RS_RS01125 - PLP-dependent aminotransferase family protein, at 250,678 to 251,886 _RS01125 RS_RS25275: RS_RS25275 - hypothetical protein, at 251,916 to 252,101 _RS25275 RS_RS01130: RS_RS01130 - membrane protein, at 252,098 to 253,294 _RS01130 RS_RS01135: RS_RS01135 - LysE family translocator, at 253,302 to 253,937 _RS01135
Group Condition RS_RS25270 RS_RS01125 RS_RS25275 RS_RS01130 RS_RS01135
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.6 +0.1 N.D. -0.2 -0.3
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.2 -0.5 N.D. -0.1 -0.1
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.1 N.D. -0.2 -0.5
carbon source D-Galactose (C) -0.4 -0.5 N.D. -0.1 +0.3
carbon source succinate (C) -0.3 -0.3 N.D. +0.2 -0.1
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.5 N.D. +0.0 +0.1
carbon source L-Aspartic Acid (C) -0.1 -0.5 N.D. +0.0 +0.1
carbon source L-Glutamic (C) -0.6 -0.2 N.D. -0.0 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.1 N.D. -0.3 -0.2
carbon source L-Glutamine (C) -0.3 -0.3 N.D. -0.2 +0.4
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +0.1 N.D. +0.1 -0.6
carbon source L-Glutamine (C) -0.3 -0.4 N.D. +0.1 +0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.0 +0.2 N.D. -0.2 -0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 -0.3 N.D. -0.3 +0.3
carbon source L-Aspartic Acid (C) -0.6 -0.3 N.D. +0.5 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 +0.3 N.D. -0.0 -0.2
carbon source D,L-Malic Acid (C) -0.2 -0.5 N.D. +0.3 +0.2
carbon source D-Glucose (C) +0.3 -0.3 N.D. -0.2 +0.2
carbon source L-Aspartic Acid (C) +0.4 -0.6 N.D. +0.3 -0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 +0.3 N.D. +0.0 -0.3
carbon source L-Glutamic (C) -0.1 -0.3 N.D. -0.1 +0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.2 +0.4 N.D. -0.1 -0.2
carbon source pyruvate (C) +0.3 -0.4 N.D. -0.0 +0.2
carbon source succinate (C) +0.7 -0.4 N.D. -0.0 +0.0
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.0 +0.3 N.D. +0.3 -0.3
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.4 N.D. +0.6 -0.5
carbon source L-Glutamic (C) +0.4 -0.4 N.D. +0.3 +0.4
carbon source L-Alanine (C) +0.5 -0.3 N.D. +0.2 +0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 -0.0 N.D. +0.2 +0.3
carbon source D-Glucose (C) +0.4 -0.1 N.D. +0.0 +0.5
remove
RS_RS25270
plot		 remove
RS_RS01125
plot		 remove
RS_RS25275		 remove
RS_RS01130
plot		 remove
RS_RS01135
plot