Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS23320 and RS_RS23325 are separated by 250 nucleotidesRS_RS23325 and RS_RS23330 are separated by 285 nucleotidesRS_RS23330 and RS_RS23335 are separated by 606 nucleotidesRS_RS23335 and RS_RS23340 are separated by 56 nucleotides RS_RS23320: RS_RS23320 - class II fumarate hydratase, at 1,619,425 to 1,620,810 _RS23320 RS_RS23325: RS_RS23325 - carbohydrate kinase, at 1,621,061 to 1,621,984 _RS23325 RS_RS23330: RS_RS23330 - type III effector protein, at 1,622,270 to 1,627,498 _RS23330 RS_RS23335: RS_RS23335 - phosphoenolpyruvate--protein phosphotransferase, at 1,628,105 to 1,630,657 _RS23335 RS_RS23340: RS_RS23340 - maltoporin, at 1,630,714 to 1,631,958 _RS23340
Group Condition RS_RS23320 RS_RS23325 RS_RS23330 RS_RS23335 RS_RS23340
carbon source Sucrose (C) -0.1 -3.2 -0.3 -5.9 -3.2
carbon source Sucrose (C) +0.4 -3.4 -0.4 -3.8 -3.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -4.2 -0.1 -0.2 -0.5 -0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -4.1 -0.0 -0.4 -0.2 +0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -4.0 +0.1 -0.0 -0.1 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -4.0 +0.2 +0.1 -0.1 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -2.9 -0.0 -0.0 -0.0 +0.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.8 +0.0 +0.0 +0.3 +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.0 -0.3 +0.0 -1.0 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.2 +0.1 -0.9 -0.9
survival water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days -1.3 -0.3 -0.1 -0.1 +0.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 +0.7 +0.1 -1.3 -1.0
carbon source L-Aspartic Acid (C) -1.7 +0.1 +0.0 -0.4 +0.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.1 +0.4 -0.0 -0.4 -0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 +0.3 +0.1 -0.5 -0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.5 +0.4 +0.1 -0.7 -0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.7 +0.4 +0.2 -0.3 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 +0.2 -0.7 -0.7
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 +0.4 +0.0 +0.1 -0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 +0.4 +0.3 -0.9 -0.6
carbon source D-Glucose (C) -1.0 +0.2 -0.3 +0.2 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.4 +0.2 -0.6 -0.6
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 +0.6 +0.3 -0.6 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.8 +0.1 -0.3 -0.4
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.2 +0.2 +0.1 -0.9 +0.0
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.5 +0.8 +0.5 -0.9 -1.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.8 +0.5 +0.2 -0.5 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.4 +0.4 +0.0 -0.3 -0.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +1.2 +0.5 +0.1 -0.1 -0.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.0 +1.5 +0.7 -0.7 -0.5
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RS_RS23335
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