Fitness for 5 genes in Ralstonia solanacearum GMI1000

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 110 experiments or choose conditions or try the comparative fitness browser

500 ntRS_RS22870 and RS_RS22875 are separated by 26 nucleotidesRS_RS22875 and RS_RS22880 are separated by 33 nucleotidesRS_RS22880 and RS_RS22885 are separated by 610 nucleotidesRS_RS22885 and RS_RS22890 are separated by 181 nucleotides RS_RS22870: RS_RS22870 - permease, at 1,510,864 to 1,512,216 _RS22870 RS_RS22875: RS_RS22875 - ketohydroxyglutarate aldolase, at 1,512,243 to 1,512,869 _RS22875 RS_RS22880: RS_RS22880 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 1,512,903 to 1,513,628 _RS22880 RS_RS22885: RS_RS22885 - DNA-binding response regulator, at 1,514,239 to 1,514,463 _RS22885 RS_RS22890: RS_RS22890 - glycosyltransferase family 39 protein, at 1,514,645 to 1,516,300 _RS22890
Group Condition RS_RS22870 RS_RS22875 RS_RS22880 RS_RS22885 RS_RS22890
carbon source D-Glucose (C) -4.3 N.D. -4.8 +0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.6 N.D. -0.6 -0.4 -6.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.7 N.D. -0.1 -1.2 -5.8
stress SMSA with Ralstonia_antibiotic_mix -0.5 N.D. -0.6 -0.2 -5.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.7 N.D. -0.5 -0.3 -5.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.7 N.D. -0.1 -0.9 -5.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -0.8 N.D. +0.5 +0.3 -6.4
stress SMSA with Ralstonia_antibiotic_mix -0.2 N.D. -0.4 -0.1 -5.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.4 N.D. +0.4 -0.2 -5.6
carbon source D-Glucose (C) -4.6 N.D. -1.0 -0.5 +0.3
carbon source D-Glucose (C) -4.9 N.D. -1.7 +0.5 +0.4
carbon source Sucrose (C) -3.0 N.D. -2.7 -0.1 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet -0.8 N.D. -0.2 -0.2 -4.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.9 N.D. +0.3 +0.1 -4.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.7 N.D. -0.7 -0.2 -3.7
carbon source Sucrose (C) -4.6 N.D. -0.4 -0.3 +0.2
carbon source pyruvate (C) +0.1 N.D. -5.0 -0.1 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.7 N.D. -0.4 +0.0 -3.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.3 N.D. -0.1 -0.6 -3.8
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.9 N.D. -0.2 +1.0 -4.5
carbon source D-Galactose (C) -1.5 N.D. -1.3 -1.7 +0.2
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.4 N.D. -1.0 -0.5 -0.3
carbon source L-Alanine (C) +0.2 N.D. -4.7 +0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.6 N.D. +0.3 -0.3 -3.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.1 N.D. -0.0 +0.1 -1.9
carbon source succinate (C) +0.1 N.D. -4.2 +0.4 -0.3
carbon source L-Glutamic (C) +0.2 N.D. -4.3 +0.3 -0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -2.1 N.D. +1.1 +0.3 -1.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.8 N.D. +1.7 +0.5 -1.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.1 N.D. +1.2 +0.8 +0.2
remove
RS_RS22870
plot		 remove
RS_RS22875
plot		 remove
RS_RS22880		 remove
RS_RS22885
plot		 remove
RS_RS22890
plot