Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS26325 and RS_RS22510 overlap by 66 nucleotidesRS_RS22510 and RS_RS22515 are separated by 48 nucleotidesRS_RS22515 and RS_RS22520 are separated by 77 nucleotidesRS_RS22520 and RS_RS22525 are separated by 66 nucleotides RS_RS26325: RS_RS26325 - hypothetical protein, at 1,415,342 to 1,415,527 _RS26325 RS_RS22510: RS_RS22510 - hypothetical protein, at 1,415,462 to 1,416,139 _RS22510 RS_RS22515: RS_RS22515 - DUF2000 domain-containing protein, at 1,416,188 to 1,416,595 _RS22515 RS_RS22520: RS_RS22520 - transcriptional regulator, at 1,416,673 to 1,417,161 _RS22520 RS_RS22525: RS_RS22525 - hypothetical protein, at 1,417,228 to 1,417,725 _RS22525
Group Condition RS_RS26325 RS_RS22510 RS_RS22515 RS_RS22520 RS_RS22525
carbon source pyruvate (C) N.D. -0.2 +0.2 -1.1 -1.0
carbon source D,L-Malic Acid (C) N.D. -0.0 -0.0 -1.5 -0.0
carbon source D-Glucose (C) N.D. +0.1 -0.2 -0.5 -0.9
carbon source L-Glutamic (C) N.D. -0.0 +0.0 -0.7 -0.6
carbon source L-Aspartic Acid (C) N.D. +0.0 -0.1 -0.4 -0.8
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.3 +0.1 -0.9 -0.6
m63_quarter_strength M63_quarter_strength N.D. -0.1 -0.2 -0.3 -0.5
carbon source L-Aspartic Acid (C) N.D. -0.2 +0.0 +0.1 -0.8
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.7 -0.1 -0.2 +0.2
carbon source D-Galactose (C) N.D. +0.1 -0.7 -0.2 +0.1
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 -0.1 -0.4 +0.3
carbon source Sucrose (C) N.D. +0.2 +0.2 -0.2 -0.6
carbon source Sucrose (C) N.D. -0.0 +0.1 +0.6 -1.1
cpg CPG N.D. +0.1 -0.3 +0.3 -0.5
carbon source L-Glutamic (C) N.D. -0.2 -0.6 +0.3 +0.0
carbon source D-Glucose (C) N.D. -0.0 +0.3 +0.2 -0.8
carbon source L-Glutamic (C) N.D. +0.3 +0.1 +0.2 -0.8
carbon source succinate (C) N.D. +0.0 +0.6 -0.6 -0.2
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. -0.2 -0.3 -0.2 +0.6
carbon source L-Aspartic Acid (C) N.D. -0.0 -0.3 +0.6 -0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.2 +0.5 -0.3 +0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +0.1 -0.3 +0.3 +0.6
carbon source pyruvate (C) N.D. +0.2 -0.3 +0.4 +0.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.0 +0.3 +0.8 -0.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.1 +0.3 -0.1 +0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.0 -0.1 +0.8 +0.4
carbon source L-Alanine (C) N.D. +0.3 -0.5 +0.3 +1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. +0.0 +0.6 +0.5 +0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. +0.1 +0.0 +0.7 +0.5
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.2 -0.6 +1.2 +0.5
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