Fitness for 5 genes in Ralstonia solanacearum GMI1000

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 110 experiments or choose conditions or try the comparative fitness browser

500 ntRS_RS22485 and RS_RS22490 are separated by 36 nucleotidesRS_RS22490 and RS_RS22495 are separated by 19 nucleotidesRS_RS22495 and RS_RS22500 are separated by 177 nucleotidesRS_RS22500 and RS_RS22505 are separated by 214 nucleotides RS_RS22485: RS_RS22485 - MexE family multidrug efflux RND transporter periplasmic adaptor subunit, at 1,406,849 to 1,408,165 _RS22485 RS_RS22490: RS_RS22490 - multidrug efflux RND transporter permease subunit, at 1,408,202 to 1,411,411 _RS22490 RS_RS22495: RS_RS22495 - RND transporter, at 1,411,431 to 1,412,957 _RS22495 RS_RS22500: RS_RS22500 - AraC family transcriptional regulator, at 1,413,135 to 1,413,947 _RS22500 RS_RS22505: RS_RS22505 - low specificity L-threonine aldolase, at 1,414,162 to 1,415,259 _RS22505
Group Condition RS_RS22485 RS_RS22490 RS_RS22495 RS_RS22500 RS_RS22505
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -3.8 -4.0 -2.6 -0.4 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -3.6 -3.8 -2.4 +0.0 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -1.7 -1.8 -1.1 -0.0 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -1.7 -1.6 -0.9 -0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -1.0 -0.9 -0.4 -0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.9 -0.8 -0.1 -0.4 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.8 -1.0 -0.2 -0.2 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.8 -0.9 -0.3 -0.1 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.9 -0.7 +0.2 -0.3 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.6 -0.8 -0.1 -0.0 +0.0
carbon source L-Glutamine (C) +0.1 -0.1 -0.2 -1.0 -0.1
carbon source L-Aspartic Acid (C) -0.0 -0.0 -0.0 -1.2 +0.0
carbon source D-Glucose (C) +0.0 -0.3 -0.5 -0.4 -0.1
stress SMSA with Ralstonia_antibiotic_mix -0.3 -0.3 -0.4 -0.2 -0.1
carbon source pyruvate (C) -0.2 -0.2 -0.1 -0.7 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.5 -0.3 -0.3 -0.1 -0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.4 -0.5 -0.3 -0.1 +0.1
carbon source L-Glutamic (C) -0.2 -0.3 -0.1 -0.6 +0.1
carbon source L-Glutamine (C) -0.2 -0.3 -0.4 -0.5 +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.4 -0.6 -0.1 -0.2 +0.3
carbon source L-Aspartic Acid (C) +0.0 -0.1 -0.5 -0.6 +0.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 -0.3 +0.4 -0.0 -0.0
carbon source L-Alanine (C) -0.2 +0.3 -0.3 +0.2 -0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 -0.1 +0.2 +0.2 -0.7
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.3 +0.2 +0.1 +0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.3 +0.0 -0.1 -0.4 +0.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.6 +0.0 -0.2 -0.2 +0.3
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 -0.2 +0.4 +0.5 +0.3
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 -0.0 +0.7 +0.9 +0.2
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 +0.0 +0.5 +1.3 +0.3
remove
RS_RS22485
plot
remove
RS_RS22490
plot
remove
RS_RS22495
remove
RS_RS22500
plot
remove
RS_RS22505
plot