Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS22400 and RS_RS22405 are separated by 297 nucleotidesRS_RS22405 and RS_RS22410 are separated by 121 nucleotidesRS_RS22410 and RS_RS22415 are separated by 239 nucleotidesRS_RS22415 and RS_RS22420 are separated by 388 nucleotides RS_RS22400: RS_RS22400 - hemagglutinin, at 1,384,925 to 1,386,304 _RS22400 RS_RS22405: RS_RS22405 - ShlB/FhaC/HecB family hemolysin secretion/activation protein, at 1,386,602 to 1,388,275 _RS22405 RS_RS22410: RS_RS22410 - helix-turn-helix transcriptional regulator, at 1,388,397 to 1,389,689 _RS22410 RS_RS22415: RS_RS22415 - bifunctional diguanylate cyclase/phosphodiesterase, at 1,389,929 to 1,392,016 _RS22415 RS_RS22420: RS_RS22420 - endonuclease, at 1,392,405 to 1,392,713 _RS22420
Group Condition RS_RS22400 RS_RS22405 RS_RS22410 RS_RS22415 RS_RS22420
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.1 -1.5 -0.0 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.3 -0.0 -0.9 -0.3 N.D.
carbon source L-Glutamine (C) +0.0 +0.1 -1.0 -0.6 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 -0.1 -1.2 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 +0.1 -1.0 -0.4 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.3 -0.1 -1.2 +0.0 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -0.0 -1.2 +0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.4 -0.0 -1.3 -0.0 N.D.
carbon source L-Aspartic Acid (C) +0.3 +0.0 -0.7 -0.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 -0.1 -1.0 -0.1 N.D.
carbon source L-Glutamine (C) +0.3 +0.2 -1.3 -0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.5 +0.0 -1.3 -0.0 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days +0.5 -0.0 -1.2 +0.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.6 -0.0 -1.2 -0.0 N.D.
carbon source L-Glutamic (C) +0.2 +0.0 -1.0 +0.2 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.5 +0.1 -1.0 -0.1 N.D.
carbon source pyruvate (C) +0.5 +0.0 -0.9 -0.1 N.D.
carbon source D-Glucose (C) +0.5 +0.1 -1.1 +0.1 N.D.
carbon source L-Glutamic (C) +0.5 +0.1 -0.9 -0.1 N.D.
carbon source D-Galactose (C) +0.4 +0.1 -0.8 -0.1 N.D.
carbon source L-Aspartic Acid (C) +0.4 +0.0 -0.8 +0.1 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.7 +0.0 -0.9 +0.1 N.D.
carbon source succinate (C) +0.6 -0.0 -0.9 +0.2 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 +0.2 +0.6 +0.3 N.D.
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 +0.1 +0.6 +0.5 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.1 +1.0 +0.2 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 +0.2 +1.3 +0.4 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.7 +0.1 +1.1 +0.3 N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 -0.0 +1.5 +0.6 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.1 +0.5 +0.7 +0.2 N.D.
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