Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS21365 and RS_RS21370 are separated by 42 nucleotidesRS_RS21370 and RS_RS21375 are separated by 21 nucleotidesRS_RS21375 and RS_RS21380 are separated by 273 nucleotidesRS_RS21380 and RS_RS21385 are separated by 90 nucleotides RS_RS21365: RS_RS21365 - DNA translocase FtsK, at 1,117,743 to 1,120,622 _RS21365 RS_RS21370: RS_RS21370 - hypothetical protein, at 1,120,665 to 1,122,776 _RS21370 RS_RS21375: RS_RS21375 - type I glutamate--ammonia ligase, at 1,122,798 to 1,124,273 _RS21375 RS_RS21380: RS_RS21380 - LysR family transcriptional regulator, at 1,124,547 to 1,125,473 _RS21380 RS_RS21385: RS_RS21385 - oxidoreductase, at 1,125,564 to 1,126,430 _RS21385
Group Condition RS_RS21365 RS_RS21370 RS_RS21375 RS_RS21380 RS_RS21385
carbon source L-Aspartic Acid (C) +0.1 -0.0 -0.0 -1.5 -1.0
carbon source D-Glucose (C) +0.1 -0.2 -0.1 -0.8 -1.3
carbon source Sucrose (C) -0.1 +0.1 -0.0 -0.7 -1.3
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.1 +0.1 +0.2 -2.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 -0.3 -0.3 -0.1 -1.0
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.1 +0.4 -0.8 -1.1
carbon source L-Alanine (C) -0.1 -0.1 +0.0 -0.9 -0.6
carbon source pyruvate (C) +0.0 -0.1 -0.1 -0.9 -0.4
carbon source L-Glutamine (C) -0.1 +0.2 -0.0 -0.7 -0.6
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.1 -0.3 +0.3 -0.1 -0.9
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 -0.2 +0.5 +0.6 -1.6
carbon source L-Glutamic (C) -0.3 +0.5 -0.1 -0.7 +0.0
carbon source D-Galactose (C) -0.2 -0.2 -0.4 +0.7 -0.1
carbon source D-Galactose (C) +0.0 -0.5 -0.0 -0.7 +1.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.3 +0.7 -0.2 +0.2 -0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.2 +0.1 +0.2 -0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.1 -0.3 -0.1 -0.2 +0.9
carbon source L-Glutamine (C) -0.0 -0.5 +0.1 -0.6 +1.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 -0.1 -0.2 +0.1 +0.9
carbon source L-Glutamic (C) +0.1 -0.7 +0.2 -0.2 +1.2
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.2 +0.1 -0.3 -0.3 +0.9
carbon source Sucrose (C) +0.0 +0.2 -0.2 -0.1 +0.9
carbon source succinate (C) -0.5 +0.1 -0.2 +0.3 +1.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.2 +0.6 -0.1 +0.3 +0.5
carbon source L-Alanine (C) -0.3 +0.2 -0.1 +0.7 +0.5
carbon source D,L-Malic Acid (C) +0.2 +0.0 -0.0 -0.3 +1.2
carbon source L-Aspartic Acid (C) -0.1 +0.1 -0.0 +0.6 +0.8
carbon source L-Glutamic (C) -0.0 -0.1 -0.1 +0.3 +1.3
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +0.0 -0.0 +0.2 +1.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 +0.1 +0.0 +0.8 +1.0
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