Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS20515 and RS_RS20520 are separated by 94 nucleotidesRS_RS20520 and RS_RS20525 are separated by 443 nucleotidesRS_RS20525 and RS_RS20530 are separated by 44 nucleotidesRS_RS20530 and RS_RS20535 are separated by 7 nucleotides RS_RS20515: RS_RS20515 - ABC transporter ATP-binding protein, at 896,786 to 897,529 _RS20515 RS_RS20520: RS_RS20520 - hypothetical protein, at 897,624 to 897,944 _RS20520 RS_RS20525: RS_RS20525 - cytochrome P450, at 898,388 to 899,584 _RS20525 RS_RS20530: RS_RS20530 - EamA/RhaT family transporter, at 899,629 to 900,540 _RS20530 RS_RS20535: RS_RS20535 - membrane protein, at 900,548 to 901,360 _RS20535
Group Condition RS_RS20515 RS_RS20520 RS_RS20525 RS_RS20530 RS_RS20535
carbon source L-Glutamic (C) +0.1 -0.3 +0.2 -0.4 -0.6
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 -0.2 -0.3 +0.1 -0.5
carbon source D-Glucose (C) +0.0 +0.0 -0.3 +0.2 -0.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 -0.1 +0.0 -0.4 -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.4 -0.1 -0.3 +0.0 -0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.2 +0.4 +0.2 +0.0 -1.0
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 +0.3 -0.4 +0.0 +0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.1 +0.2 +0.3 -0.1 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.2 +0.4 +0.6 -0.0 -1.1
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.4 +0.3 -0.0 -0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.1 +0.2 +0.3 +0.1 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.3 -0.0 -0.2 +0.4 -0.2
carbon source L-Glutamic (C) +0.2 -0.2 -0.1 +0.2 +0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.2 -0.0 +0.4 +0.3 -0.6
carbon source L-Aspartic Acid (C) +0.3 -0.5 +0.1 +0.1 +0.4
carbon source D-Glucose (C) +0.3 +0.1 -0.3 -0.2 +0.4
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.2 +0.1 -0.1 +0.4 -0.2
carbon source succinate (C) +0.0 -0.2 +0.2 +0.6 +0.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.0 +0.1 +0.8 +0.1
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 +0.2 -0.2 +0.4 +0.3
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.4 -0.4 +0.0 +0.2 +0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 -0.1 +0.1 +0.4 +0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.5 +0.4 +0.4 +0.0 -0.4
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +0.7 +0.2 -0.3 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.2 +0.1 +0.1 +0.3
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 -0.0 +0.2 +0.6 -0.2
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +0.5 -0.2 +0.2 +0.5
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.0 -0.1 +0.6 +0.3 -0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.3 +0.1 +0.9 +0.4
carbon source D-Galactose (C) +0.4 +0.5 +0.0 -0.0 +1.7
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