Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS20140 and RS_RS20145 are separated by 14 nucleotidesRS_RS20145 and RS_RS20150 are separated by 97 nucleotidesRS_RS20150 and RS_RS20155 are separated by 510 nucleotidesRS_RS20155 and RS_RS20160 are separated by 52 nucleotides RS_RS20140: RS_RS20140 - sel1 repeat family protein, at 770,334 to 771,644 _RS20140 RS_RS20145: RS_RS20145 - PAAR domain-containing protein, at 771,659 to 771,949 _RS20145 RS_RS20150: RS_RS20150 - hypothetical protein, at 772,047 to 772,697 _RS20150 RS_RS20155: RS_RS20155 - lipopolysaccharide heptosyltransferase I, at 773,208 to 774,206 _RS20155 RS_RS20160: RS_RS20160 - acyltransferase, at 774,259 to 775,386 _RS20160
Group Condition RS_RS20140 RS_RS20145 RS_RS20150 RS_RS20155 RS_RS20160
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -6.1 +0.4 -0.1 +0.0 -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -6.0 +0.4 -0.1 +0.0 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -5.6 +0.3 -0.2 +0.1 -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -5.2 -0.2 +0.1 -0.2 +0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -4.6 +0.1 -0.5 -0.1 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -5.5 +0.3 -0.3 +0.0 -0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -4.8 -0.2 -0.1 +0.0 -0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -5.1 -0.3 -0.0 +0.2 +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -5.1 +0.5 -0.0 -0.2 -0.1
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -4.1 -0.1 -0.0 -0.4 -0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -4.6 +0.1 +0.0 +0.0 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -5.0 +0.4 +0.0 +0.1 -0.0
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.8 -1.5 -0.2 +0.3 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.2 +0.2 -0.2 -0.0 -0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.1 +0.1 -0.2 +0.0 -0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -4.4 +0.5 +0.8 -0.3 -0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -4.1 +0.3 +0.1 +0.0 -0.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.9 -0.2 +0.1 +0.4 +0.0
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.4 +0.1 +0.4 -0.6 -0.1
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -3.5 -0.1 +0.1 +0.1 -0.1
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.0 -0.7 +0.1 +0.1 +0.0
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.0 -1.7 +0.4 -0.1 +0.0
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.4 +0.3 +0.3 -0.2 -0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -2.7 +0.5 -0.3 -0.2 -0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.3 +0.7 +0.0 +0.2 -0.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.7 +1.2 +0.4 -0.5 -0.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.9 +0.4 +0.1 +0.9 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -3.0 +0.9 +0.8 -0.1 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.2 -0.1 +0.3 +2.6 +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.2 -0.2 +0.5 +4.2 +0.3
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