Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS19660 and RS_RS19665 are separated by 165 nucleotidesRS_RS19665 and RS_RS19670 are separated by 10 nucleotidesRS_RS19670 and RS_RS19675 are separated by 134 nucleotidesRS_RS19675 and RS_RS19680 overlap by 4 nucleotides RS_RS19660: RS_RS19660 - divalent metal cation transporter, at 648,667 to 649,995 _RS19660 RS_RS19665: RS_RS19665 - molecular chaperone HscC, at 650,161 to 651,942 _RS19665 RS_RS19670: RS_RS19670 - J domain-containing protein, at 651,953 to 653,818 _RS19670 RS_RS19675: RS_RS19675 - DNA-binding response regulator, at 653,953 to 654,618 _RS19675 RS_RS19680: RS_RS19680 - two-component sensor histidine kinase, at 654,615 to 656,093 _RS19680
Group Condition RS_RS19660 RS_RS19665 RS_RS19670 RS_RS19675 RS_RS19680
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.0 -0.2 -0.0 -1.5 -1.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.0 +0.1 +0.2 -1.6 -1.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.4 -0.1 -0.5 +1.3 +0.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.4 -0.2 -0.3 +1.2 +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.3 +0.0 +0.9 +1.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.4 +0.4 -0.1 +1.0 +1.2
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.7 +0.4 +0.2 +1.1 +1.3
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 -0.4 +0.1 +1.4 +1.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.3 -0.1 +1.2 +1.5
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 -0.1 -0.1 +1.5 +1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.2 +0.5 -0.0 +1.1 +1.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.0 +0.0 -0.2 +1.5 +1.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.1 +0.1 +0.0 +1.3 +1.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 +0.1 -0.0 +1.3 +1.3
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 -0.2 +0.1 +1.6 +1.7
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.2 +0.1 +1.2 +2.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.1 -0.0 +1.4 +1.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.2 +0.1 +1.4 +1.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.4 +0.3 +0.0 +1.4 +1.5
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +0.0 +0.0 +1.9 +1.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.3 +0.7 +0.1 +1.6 +1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.0 +0.2 +0.1 +2.1 +2.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.0 +0.1 +2.1 +2.1
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.5 +0.7 -0.1 +1.9 +1.5
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 -0.1 -0.2 +1.7 +2.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +0.6 -0.1 +1.9 +2.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.3 +0.1 +2.7 +2.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.3 +0.3 +2.1 +2.5
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 -0.3 -0.0 +2.3 +3.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.3 -0.1 +0.0 +2.7 +3.5
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