Fitness for 5 genes in Ralstonia solanacearum GMI1000

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RS_RS19240	RS_RS19245	RS_RS19250	RS_RS26075	RS_RS19255
carbon source	L-Aspartic Acid (C)	-0.0	-0.3	+0.2	-3.0	N.D.
carbon source	D-Galactose (C)	-0.1	-0.5	-0.0	-2.4	N.D.
carbon source	L-Glutamic (C)	-0.7	-0.0	+0.3	-2.6	N.D.
carbon source	D-Glucose (C)	-0.2	-0.2	+0.4	-2.9	N.D.
carbon source	D,L-Malic Acid (C)	-0.3	-0.5	+0.6	-2.5	N.D.
carbon source	pyruvate (C)	-0.4	-0.3	-0.1	-1.7	N.D.
carbon source	succinate (C)	+0.2	-0.1	-0.3	-2.0	N.D.
in planta	Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.6	-0.2	-0.2	-1.2	N.D.
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	-0.1	-0.3	+0.1	-1.6	N.D.
carbon source	L-Glutamine (C)	-0.2	-0.3	+0.0	-1.2	N.D.
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	-0.2	-0.1	+0.2	-1.3	N.D.
m63_quarter_strength	M63_quarter_strength	+0.1	-0.1	+0.4	-1.8	N.D.
carbon source	L-Glutamine (C)	-0.1	-0.3	-0.1	-0.9	N.D.
in planta	Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.4	-0.1	-0.1	-0.7	N.D.
stress	SMSA with Ralstonia_antibiotic_mix	-0.5	-0.2	-0.0	-0.6	N.D.
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-0.2	-0.2	-0.2	-0.7	N.D.
in planta	Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.0	-0.1	-0.1	-1.1	N.D.
in planta	Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+0.0	+0.2	+0.0	-1.4	N.D.
m63_quarter_strength	M63_quarter_strength	-0.1	+0.1	-0.1	-0.9	N.D.
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	+0.1	+0.4	-0.8	-0.3	N.D.
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	+0.2	+0.4	-0.6	-0.3	N.D.
in planta	Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+0.6	-0.1	+0.2	-0.6	N.D.
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+0.3	+0.3	+0.4	-0.7	N.D.
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	-0.3	-0.2	-0.0	+0.7	N.D.
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol	-0.4	-0.0	+0.0	+0.8	N.D.
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	+0.5	+0.3	-0.4	+0.3	N.D.
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol	-0.2	-0.2	-0.0	+1.2	N.D.
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	+0.6	+0.2	+0.2	-0.2	N.D.
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	+0.3	+0.2	+0.3	+0.4	N.D.
in planta	Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.0	-0.4	+0.4	+1.4	N.D.