Fitness for 5 genes in Ralstonia solanacearum GMI1000

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 110 experiments or choose conditions or try the comparative fitness browser

500 ntRS_RS18765 and RS_RS18770 are separated by 262 nucleotidesRS_RS18770 and RS_RS18775 are separated by 84 nucleotidesRS_RS18775 and RS_RS18780 are separated by 517 nucleotidesRS_RS18780 and RS_RS18785 are separated by 115 nucleotides RS_RS18765: RS_RS18765 - GntR family transcriptional regulator, at 442,575 to 443,303 _RS18765 RS_RS18770: RS_RS18770 - porin, at 443,566 to 444,621 _RS18770 RS_RS18775: RS_RS18775 - DNA-binding response regulator, at 444,706 to 445,386 _RS18775 RS_RS18780: RS_RS18780 - flagellar protein FlgN, at 445,904 to 446,365 _RS18780 RS_RS18785: RS_RS18785 - flagellar biosynthesis anti-sigma factor FlgM, at 446,481 to 446,801 _RS18785
Group Condition RS_RS18765 RS_RS18770 RS_RS18775 RS_RS18780 RS_RS18785
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.3 -0.3 -0.3 -0.7 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.1 -0.3 -0.2 -0.5 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.5 -0.4 -0.2 -0.6 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.3 -0.1 -1.3 N.D.
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 +0.1 -0.1 -0.5 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.3 -0.3 -0.2 -0.5 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.5 -0.2 -0.2 -0.2 N.D.
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 -0.2 -0.4 -0.5 N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 -0.3 -0.2 +0.3 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 -0.2 -0.4 +1.3 N.D.
carbon source L-Glutamine (C) -0.6 +0.3 +0.4 -0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.4 +0.2 +0.4 +0.0 N.D.
carbon source D-Glucose (C) -0.4 +0.2 +0.2 +0.3 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -0.2 +0.2 +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -0.3 +0.1 +0.5 +0.2 N.D.
carbon source L-Glutamic (C) -0.4 +0.2 +0.2 +0.6 N.D.
carbon source pyruvate (C) -0.2 +0.3 +0.6 +0.1 N.D.
carbon source L-Glutamine (C) -0.3 +0.3 +0.4 +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.4 +0.3 +0.5 +0.6 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.3 +0.2 +0.4 +0.8 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 +0.3 +0.5 +0.4 N.D.
cpg CPG -0.2 +0.1 +0.6 +0.5 N.D.
carbon source Sucrose (C) +0.6 +0.2 +0.3 +0.0 N.D.
carbon source succinate (C) +0.3 +0.2 +0.3 +0.4 N.D.
carbon source pyruvate (C) -0.2 +0.2 +0.7 +0.6 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 +0.3 +0.3 +0.6 N.D.
cpg CPG +0.0 +0.3 +0.5 +0.5 N.D.
carbon source L-Aspartic Acid (C) +0.3 +0.0 +0.2 +0.8 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.2 +0.3 +0.3 +0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.1 +0.5 +0.8 +0.4 N.D.
remove
RS_RS18765
plot		 remove
RS_RS18770
plot		 remove
RS_RS18775		 remove
RS_RS18780
plot		 remove
RS_RS18785
plot