Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS17480 and RS_RS17485 are separated by 4 nucleotidesRS_RS17485 and RS_RS17490 overlap by 4 nucleotidesRS_RS17490 and RS_RS17495 are separated by 52 nucleotidesRS_RS17495 and RS_RS17500 are separated by 21 nucleotides RS_RS17480: RS_RS17480 - DUF3483 domain-containing protein, at 67,080 to 69,005 _RS17480 RS_RS17485: RS_RS17485 - electron transfer flavoprotein subunit alpha/FixB family protein, at 69,010 to 70,188 _RS17485 RS_RS17490: RS_RS17490 - electron transfer flavoprotein subunit beta/FixA family protein, at 70,185 to 70,970 _RS17490 RS_RS17495: RS_RS17495 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 71,023 to 72,267 _RS17495 RS_RS17500: RS_RS17500 - hybrid-cluster NAD(P)-dependent oxidoreductase, at 72,289 to 73,437 _RS17500
Group Condition RS_RS17480 RS_RS17485 RS_RS17490 RS_RS17495 RS_RS17500
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.3 -0.3 -0.6 -0.3 -0.1
carbon source succinate (C) +0.1 -0.4 -0.9 -0.2 -0.1
carbon source Sucrose (C) -0.1 -0.3 -0.1 -0.5 -0.5
carbon source D-Glucose (C) +0.0 -0.5 -0.4 -0.2 -0.2
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -0.3 -0.5 -0.3 +0.2
carbon source L-Alanine (C) -0.3 -0.2 -0.1 -0.5 -0.3
carbon source Sucrose (C) -0.1 -0.2 -0.1 -0.6 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 -0.1 -0.3 -0.6 -0.3
carbon source L-Alanine (C) -0.2 -0.1 -0.1 -0.4 -0.3
carbon source D-Galactose (C) +0.0 -0.6 -0.2 -0.6 +0.3
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.4 -0.4 -0.2 +0.3 -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 -0.3 -0.2 +0.2 +0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.0 -0.2 +0.3 -0.5 +0.0
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.1 -0.4 -0.2 +0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.3 -0.3 +0.2 -0.4 +0.1
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 -0.3 -0.4 -0.1 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.2 -0.4 +0.1 +0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.1 -0.1 -0.4 +0.4 +0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.2 -0.2 +0.2 +0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 +0.5 -0.3 +0.6 +0.1
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 -0.3 +0.6 +0.1 -0.0
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.5 +0.5 +0.6 +0.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +0.8 +0.2 -0.0 -0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.0 -0.1 +0.1 +0.4 +0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.1 -0.2 +0.5 +0.2 +0.5
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 -0.2 +0.5 +0.1 +0.2
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 -0.0 +0.4 +0.2 +0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.3 +0.3 +0.9 +0.1 -0.1
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.2 +0.1 +0.3 +0.8 +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.9 -0.3 +0.7 +0.4 -0.1
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