Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS17060 and RS_RS17065 are separated by 36 nucleotidesRS_RS17065 and RS_RS17070 are separated by 148 nucleotidesRS_RS17070 and RS_RS17075 are separated by 6 nucleotidesRS_RS17075 and RS_RS17080 overlap by 4 nucleotides RS_RS17060: RS_RS17060 - DNA-binding response regulator, at 3,681,029 to 3,681,694 _RS17060 RS_RS17065: RS_RS17065 - membrane protein, at 3,681,731 to 3,682,516 _RS17065 RS_RS17070: RS_RS17070 - alpha/beta hydrolase, at 3,682,665 to 3,683,465 _RS17070 RS_RS17075: RS_RS17075 - FAD-binding oxidoreductase, at 3,683,472 to 3,684,779 _RS17075 RS_RS17080: RS_RS17080 - amino acid ABC transporter ATP-binding protein, at 3,684,776 to 3,685,537 _RS17080
Group Condition RS_RS17060 RS_RS17065 RS_RS17070 RS_RS17075 RS_RS17080
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -0.9 -0.4 -0.7 N.D.
carbon source D-Galactose (C) -1.4 -0.0 -0.4 -0.2 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.8 -0.4 -0.5 -0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.1 +0.2 -1.6 +0.1 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.3 -0.2 -0.3 -0.3 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.5 +0.3 -0.4 -0.4 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 -0.0 -0.1 -0.4 N.D.
carbon source L-Glutamic (C) -0.3 -0.3 -0.2 -0.1 N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 -0.5 +0.1 -0.4 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.3 -0.3 -0.3 +0.4 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 +0.2 -0.9 +0.2 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.5 -0.3 +0.0 +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.2 +0.2 -0.0 -0.5 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.2 -0.0 -0.3 +0.2 N.D.
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 -0.4 -0.1 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.3 -0.1 +0.4 -0.3 N.D.
smsa no antibiotic control SMSA no antibiotic control -0.2 +0.2 +0.2 -0.4 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.2 -0.1 +0.2 -0.3 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.2 -0.2 +0.2 +0.3 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.2 +0.2 +0.4 -0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 -0.1 +0.3 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.2 +0.5 -0.1 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +0.2 +0.5 +0.0 N.D.
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.4 -0.3 +0.3 +0.0 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.0 +0.3 +0.5 -0.1 N.D.
carbon source D-Glucose (C) +0.0 +0.0 +0.8 +0.1 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.1 +0.0 +0.9 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.1 +0.3 +0.1 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 +0.2 +0.4 +0.3 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 +0.5 +0.8 +0.8 N.D.
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