Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS16670 and RS_RS16675 overlap by 1 nucleotidesRS_RS16675 and RS_RS16680 are separated by 237 nucleotidesRS_RS16680 and RS_RS16685 are separated by 131 nucleotidesRS_RS16685 and RS_RS16690 are separated by 59 nucleotides RS_RS16670: RS_RS16670 - ribosomal RNA small subunit methyltransferase G, at 3,589,219 to 3,589,890 _RS16670 RS_RS16675: RS_RS16675 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 3,589,890 to 3,591,833 _RS16675 RS_RS16680: RS_RS16680 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,592,071 to 3,593,219 _RS16680 RS_RS16685: RS_RS16685 - hypothetical protein, at 3,593,351 to 3,593,899 _RS16685 RS_RS16690: RS_RS16690 - short chain dehydrogenase, at 3,593,959 to 3,594,564 _RS16690
Group Condition RS_RS16670 RS_RS16675 RS_RS16680 RS_RS16685 RS_RS16690
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.4 -1.0 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.6 -0.4 N.D.
carbon source succinate (C) N.D. N.D. -0.6 -0.2 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.5 -0.2 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. N.D. -0.4 -0.3 N.D.
carbon source D-Galactose (C) N.D. N.D. -0.4 -0.3 N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.2 -0.5 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. -0.8 +0.1 N.D.
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -0.4 -0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. N.D. -0.2 -0.4 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. +0.2 -0.7 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. -0.6 +0.0 N.D.
carbon source L-Glutamic (C) N.D. N.D. -0.6 +0.2 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. +0.3 -0.7 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. +0.4 -0.8 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. +0.5 -0.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. N.D. -0.3 +0.2 N.D.
carbon source L-Alanine (C) N.D. N.D. -0.4 +0.3 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.5 +0.6 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -0.3 +0.4 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. +0.5 -0.4 N.D.
carbon source L-Alanine (C) N.D. N.D. -0.2 +0.4 N.D.
carbon source L-Glutamic (C) N.D. N.D. -0.0 +0.5 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. N.D. +0.4 +0.2 N.D.
carbon source succinate (C) N.D. N.D. +0.0 +0.6 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. +0.4 +0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. +0.4 +0.4 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. +0.3 +0.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. +0.4 +0.6 N.D.
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. +0.1 +1.0 N.D.
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