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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum GMI1000
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RS_RS16610 and RS_RS16615 are separated by 96 nucleotides
RS_RS16615 and RS_RS16620 are separated by 89 nucleotides
RS_RS16620 and RS_RS16625 are separated by 36 nucleotides
RS_RS16625 and RS_RS16630 are separated by 64 nucleotides
RS_RS16610: RS_RS16610 - membrane protein, at 3,577,002 to 3,579,365
_RS16610
RS_RS16615: RS_RS16615 - ATP synthase epsilon chain 1, at 3,579,462 to 3,579,875
_RS16615
RS_RS16620: RS_RS16620 - ATP synthase subunit beta, at 3,579,965 to 3,581,368
_RS16620
RS_RS16625: RS_RS16625 - ATP synthase subunit gamma, at 3,581,405 to 3,582,280
_RS16625
RS_RS16630: RS_RS16630 - ATP synthase subunit alpha, at 3,582,345 to 3,583,886
_RS16630
Group
Condition
RS
_RS16610
RS
_RS16615
RS
_RS16620
RS
_RS16625
RS
_RS16630
carbon source
D-Galactose (C)
-0.5
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.4
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted
-0.4
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
L-Aspartic Acid (C)
-0.3
N.D.
N.D.
N.D.
N.D.
xylem sap
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi
-0.3
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems
-0.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems
-0.2
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet
-0.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted
-0.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
-0.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted
-0.2
N.D.
N.D.
N.D.
N.D.
stress
SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
L-Aspartic Acid (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
L-Alanine (C)
+0.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days
+0.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days
+0.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days
+0.2
N.D.
N.D.
N.D.
N.D.
survival
water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days
+0.2
N.D.
N.D.
N.D.
N.D.
in planta
Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
L-Glutamine (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
+0.3
N.D.
N.D.
N.D.
N.D.
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