Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS16510 and RS_RS16515 are separated by 138 nucleotidesRS_RS16515 and RS_RS16520 are separated by 701 nucleotidesRS_RS16520 and RS_RS16525 are separated by 163 nucleotidesRS_RS16525 and RS_RS16530 are separated by 5 nucleotides RS_RS16510: RS_RS16510 - glycine dehydrogenase, at 3,547,560 to 3,550,508 _RS16510 RS_RS16515: RS_RS16515 - L-serine ammonia-lyase, at 3,550,647 to 3,552,023 _RS16515 RS_RS16520: RS_RS16520 - oligopeptide transporter, OPT family, at 3,552,725 to 3,554,776 _RS16520 RS_RS16525: RS_RS16525 - glutamate--cysteine ligase, at 3,554,940 to 3,556,073 _RS16525 RS_RS16530: RS_RS16530 - potassium transporter Kef, at 3,556,079 to 3,557,302 _RS16530
Group Condition RS_RS16510 RS_RS16515 RS_RS16520 RS_RS16525 RS_RS16530
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 -0.0 -0.0 -1.0 -1.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.1 -0.4 +0.0 -0.0 +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -2.0 -0.3 +0.0 +0.0 -0.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.4 +0.1 -0.2 -1.1 -0.7
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 +0.0 +0.3 -0.8 -0.9
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.3 -0.0 -1.0 -0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.2 +0.0 -0.5 -0.6 -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.5 -0.1 -0.2 -0.5 -0.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.6 -0.4 +0.1 +0.0 +0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.6 -0.0 -0.3 +0.1 +0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.2 +0.1 -0.1 -0.8 -0.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.2 -0.5 -0.2 +0.2 +0.0
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -0.4 +0.5 -0.6 -0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.5 -0.6 -0.4 -0.0 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.3 -0.4 +0.1 -0.0 +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.5 -0.8 -0.1 -0.1 -0.0
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 +0.3 -0.2 -1.2 -1.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.2 -0.2 -0.5 -0.5 -0.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.1 -0.4 -0.3 -0.5 -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.8 -0.6 -0.1 +0.1 +0.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 +0.2 +0.1 -0.8 -0.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 +0.1 +0.5 -0.9 -1.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -0.6 -0.7 -0.2 +0.1 -0.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 +0.1 +0.5 -0.8 -0.6
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 +0.2 +0.0 -0.6 -0.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 +0.2 +0.1 -0.4 -0.6
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.5 -0.8 +0.2 +0.0 +0.2
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 +0.4 -0.1 -0.5 -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -0.4 -0.5 +0.4 -0.1 +0.2
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.2 +0.5 +0.8 -0.5 -0.7
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