Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS15630 and RS_RS15635 are separated by 3 nucleotidesRS_RS15635 and RS_RS15640 are separated by 33 nucleotidesRS_RS15640 and RS_RS15645 are separated by 34 nucleotidesRS_RS15645 and RS_RS15650 are separated by 1 nucleotides RS_RS15630: RS_RS15630 - general secretion pathway protein GspM, at 3,348,718 to 3,349,296 _RS15630 RS_RS15635: RS_RS15635 - type II secretion system protein N, at 3,349,300 to 3,350,151 _RS15635 RS_RS15640: RS_RS15640 - type II secretion system protein GspD, at 3,350,185 to 3,352,602 _RS15640 RS_RS15645: RS_RS15645 - type II secretion system protein GspE, at 3,352,637 to 3,354,193 _RS15645 RS_RS15650: RS_RS15650 - type II secretion system protein GspF, at 3,354,195 to 3,355,406 _RS15650
Group Condition RS_RS15630 RS_RS15635 RS_RS15640 RS_RS15645 RS_RS15650
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -5.7 -0.2 -3.7 -4.0 -3.8
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days -3.3 -0.2 -2.6 -3.4 -2.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.0 -2.0 -2.3 -2.1 -2.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -2.1 -2.1 -1.5 -4.5 -1.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -3.4 +0.1 -2.4 -2.0 -3.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -3.8 -1.9 -1.4 -1.9 -1.7
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.4 -1.7 -1.9 -3.3 -1.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -3.5 -1.7 -1.2 -2.2 -0.9
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.8 -1.3 -1.9 -2.3 -2.1
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.9 -2.0 -1.6 -3.1 -1.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.1 -0.1 -2.1 -1.5 -2.5
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.9 -1.0 -2.0 -2.6 -1.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.1 -2.0 -1.3 -2.9 -1.2
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -1.7 -0.4 -2.0 -2.3 -1.8
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.8 -1.0 -1.6 -2.2 -1.4
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.1 -1.5 -1.3 -1.1 -1.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.8 -1.8 -1.4 -1.0 -1.5
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -1.5 -2.0 -1.6 -1.3
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.9 -0.8 -1.5 -2.1 -1.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.0 -1.5 -1.3 -1.9 -1.1
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.6 -0.9 -1.2 -1.3 -1.2
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 -1.3 -0.9 -1.7 -1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -2.7 -0.8 -0.9 -1.0 -0.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -1.3 -0.8 -1.1 -1.2 -1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.6 -0.8 -1.2 -0.9 -1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.2 -0.6 -1.2 -1.3 -1.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -1.5 +0.1 -1.1 -1.6 -1.2
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.0 -0.9 -1.2 -2.1 -1.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.6 -0.9 -0.9 -0.8 -0.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.7 -1.7 -0.8 -0.2 -1.3
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