Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS14815 and RS_RS14820 are separated by 234 nucleotidesRS_RS14820 and RS_RS14825 are separated by 66 nucleotidesRS_RS14825 and RS_RS14830 are separated by 154 nucleotidesRS_RS14830 and RS_RS14835 are separated by 3 nucleotides RS_RS14815: RS_RS14815 - ABC transporter ATP-binding protein, at 3,184,945 to 3,185,910 _RS14815 RS_RS14820: RS_RS14820 - STAS domain-containing protein, at 3,186,145 to 3,186,459 _RS14820 RS_RS14825: RS_RS14825 - hypothetical protein, at 3,186,526 to 3,187,161 _RS14825 RS_RS14830: RS_RS14830 - ABC transporter, at 3,187,316 to 3,188,125 _RS14830 RS_RS14835: RS_RS14835 - outer membrane lipid asymmetry maintenance protein MlaD, at 3,188,129 to 3,188,650 _RS14835
Group Condition RS_RS14815 RS_RS14820 RS_RS14825 RS_RS14830 RS_RS14835
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol -2.4 -2.9 -5.4 -6.0 -5.5
stress SMSA with Ralstonia_antibiotic_mix +0.7 -3.1 -6.5 -6.6 -6.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.4 -2.6 -6.1 -6.4 -6.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.3 -2.9 -6.4 -5.9 -6.3
stress SMSA with Ralstonia_antibiotic_mix +0.3 -2.5 -6.3 -6.5 -6.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.7 -4.0 -5.7 -6.3 -5.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.0 -2.8 -5.4 -5.7 -5.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol +0.4 -3.1 -6.1 -5.8 -5.5
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin -0.7 -2.9 -5.1 -5.6 -5.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.4 -4.0 -4.8 -5.1 -4.9
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol +0.3 -2.3 -5.0 -4.9 -5.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.4 -2.6 -4.3 -4.9 -4.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 -4.2 -3.2 -3.2 -5.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin +0.3 -1.6 -4.5 -4.5 -4.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.4 -2.9 -3.5 -3.3 -4.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 -3.7 -3.2 -3.0 -4.4
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 -3.1 -3.6 -3.4 -3.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.9 -3.8 -3.3 -3.3 -3.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.5 -2.1 -3.2 -3.0 -4.6
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 -2.3 -3.4 -3.2 -3.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.4 -2.7 -2.5 -2.4 -4.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.2 -2.3 -3.5 -3.6 -2.9
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -2.1 -1.1 -3.0 -2.7 -3.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.5 -1.1 -3.4 -2.9 -2.9
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 -1.4 -3.5 -3.2 -4.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.9 -2.5 -3.4 -3.6 -3.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.8 -1.7 -3.1 -3.7 -3.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +1.4 -3.4 -3.2 -3.5
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.7 +2.4 +3.8 +3.8 +3.2
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet -2.0 +3.2 +4.4 +4.4 +4.1
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