Fitness for 5 genes in Ralstonia solanacearum GMI1000

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 110 experiments or choose conditions or try the comparative fitness browser

500 ntRS_RS14650 and RS_RS14655 are separated by 29 nucleotidesRS_RS14655 and RS_RS14660 are separated by 58 nucleotidesRS_RS14660 and RS_RS14665 are separated by 147 nucleotidesRS_RS14665 and RS_RS14670 are separated by 26 nucleotides RS_RS14650: RS_RS14650 - tRNA-Thr, at 3,156,294 to 3,156,369 _RS14650 RS_RS14655: RS_RS14655 - ClpXP protease specificity-enhancing factor, at 3,156,399 to 3,156,896 _RS14655 RS_RS14660: RS_RS14660 - transcription modulator protein, at 3,156,955 to 3,157,566 _RS14660 RS_RS14665: RS_RS14665 - cytochrome c, at 3,157,714 to 3,158,460 _RS14665 RS_RS14670: RS_RS14670 - cytochrome b, at 3,158,487 to 3,159,890 _RS14670
Group Condition RS_RS14650 RS_RS14655 RS_RS14660 RS_RS14665 RS_RS14670
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.3 N.D. -5.9 -7.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.0 N.D. -4.6 -7.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.0 N.D. -3.6 -7.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +0.8 N.D. -3.0 -7.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. +1.2 N.D. -2.3 -6.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +1.2 N.D. -2.8 -6.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.1 N.D. -2.2 -2.9
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -3.0 N.D. -0.9 -1.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.1 N.D. -2.6 -2.3
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days N.D. -0.9 N.D. -1.6 -2.4
carbon source L-Alanine (C) N.D. -1.8 N.D. -0.6 -2.0
carbon source L-Alanine (C) N.D. -0.7 N.D. -2.4 -1.3
carbon source L-Aspartic Acid (C) N.D. -0.9 N.D. -2.6 -0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -1.9 N.D. -0.6 -1.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 N.D. -1.4 -2.1
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -2.1 N.D. +0.1 -1.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -1.6 N.D. -0.9 -0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. +0.7 N.D. -1.5 -2.4
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -1.7 N.D. -1.2 -0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -1.7 N.D. +0.1 -1.3
carbon source Sucrose (C) N.D. +0.1 N.D. -1.5 -1.2
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. -1.0 N.D. -1.8 +0.3
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -2.1 N.D. +0.6 -0.8
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 N.D. +2.1 -2.0
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +2.1 N.D. -1.2 -1.0
carbon source D-Galactose (C) N.D. +1.6 N.D. -0.6 -1.0
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +2.0 N.D. -0.7 -0.9
carbon source L-Glutamine (C) N.D. +1.8 N.D. +0.4 -1.0
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.1 N.D. +1.1 -0.7
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +1.7 N.D. +0.9 -0.3
remove
RS_RS14650
plot		 remove
RS_RS14655
plot		 remove
RS_RS14660		 remove
RS_RS14665
plot		 remove
RS_RS14670
plot