Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS14405 and RS_RS14410 are separated by 72 nucleotidesRS_RS14410 and RS_RS14415 are separated by 0 nucleotidesRS_RS14415 and RS_RS14420 are separated by 136 nucleotidesRS_RS14420 and RS_RS14425 overlap by 4 nucleotides RS_RS14405: RS_RS14405 - murein transglycosylase, at 3,105,124 to 3,106,266 _RS14405 RS_RS14410: RS_RS14410 - hypothetical protein, at 3,106,339 to 3,106,590 _RS14410 RS_RS14415: RS_RS14415 - Co2+/Mg2+ efflux protein ApaG, at 3,106,591 to 3,106,965 _RS14415 RS_RS14420: RS_RS14420 - ribulose-phosphate 3-epimerase, at 3,107,102 to 3,107,830 _RS14420 RS_RS14425: RS_RS14425 - phosphoglycolate phosphatase, at 3,107,827 to 3,108,567 _RS14425
Group Condition RS_RS14405 RS_RS14410 RS_RS14415 RS_RS14420 RS_RS14425
carbon source L-Aspartic Acid (C) -2.1 N.D. -0.4 N.D. -0.7
cpg CPG -2.3 N.D. -0.3 N.D. +0.2
carbon source L-Alanine (C) -1.9 N.D. -0.2 N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -2.0 N.D. +0.2 N.D. -0.3
carbon source D-Glucose (C) -1.6 N.D. +0.0 N.D. -0.4
carbon source L-Glutamine (C) -1.5 N.D. -0.1 N.D. -0.2
carbon source L-Aspartic Acid (C) -1.7 N.D. +0.1 N.D. -0.1
carbon source L-Glutamine (C) -1.2 N.D. +0.2 N.D. -0.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -1.7 N.D. +0.1 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin -1.5 N.D. +0.2 N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.6 N.D. +0.0 N.D. +0.2
carbon source L-Glutamic (C) -1.1 N.D. +0.2 N.D. -0.4
m63_quarter_strength M63_quarter_strength -1.3 N.D. -0.1 N.D. +0.1
carbon source pyruvate (C) -1.5 N.D. +0.1 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -1.2 N.D. +0.2 N.D. -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -1.2 N.D. -0.2 N.D. +0.4
carbon source L-Glutamic (C) -1.3 N.D. +0.3 N.D. +0.1
stress SMSA with Ralstonia_antibiotic_mix -1.0 N.D. +0.4 N.D. -0.2
carbon source succinate (C) -1.0 N.D. +0.7 N.D. -0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.3 N.D. +0.6 N.D. +0.1
carbon source D-Galactose (C) -1.1 N.D. +0.5 N.D. -0.0
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 N.D. +0.2 N.D. -0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.6 N.D. +0.9 N.D. +0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.3 N.D. +1.1 N.D. +0.3
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +1.1 N.D. +0.4 N.D. -0.2
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +1.5 N.D. +0.3 N.D. -0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.8 N.D. +1.1 N.D. -0.3
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.0 N.D. +0.6 N.D. -0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +1.0 N.D. +0.3 N.D. +0.4
carbon source L-Aspartic Acid (C) +2.1 N.D. -0.2 N.D. +0.3
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