Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS14350 and RS_RS14355 are separated by 389 nucleotidesRS_RS14355 and RS_RS14360 are separated by 422 nucleotidesRS_RS14360 and RS_RS14365 are separated by 113 nucleotidesRS_RS14365 and RS_RS14370 are separated by 247 nucleotides RS_RS14350: RS_RS14350 - ABC transporter substrate-binding protein, at 3,092,348 to 3,093,877 _RS14350 RS_RS14355: RS_RS14355 - amidohydrolase, at 3,094,267 to 3,095,457 _RS14355 RS_RS14360: RS_RS14360 - 5S ribosomal RNA, at 3,095,880 to 3,095,992 _RS14360 RS_RS14365: RS_RS14365 - 23S ribosomal RNA, at 3,096,106 to 3,098,997 _RS14365 RS_RS14370: RS_RS14370 - tRNA-Ala, at 3,099,245 to 3,099,320 _RS14370
Group Condition RS_RS14350 RS_RS14355 RS_RS14360 RS_RS14365 RS_RS14370
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 -0.6 N.D. -4.3 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.3 -0.7 N.D. -1.8 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.0 +0.0 N.D. -2.9 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 -0.0 N.D. -2.9 N.D.
survival water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days -0.2 +0.1 N.D. -2.6 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.1 -0.2 N.D. -2.5 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.2 +0.2 N.D. -1.9 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.0 -0.3 N.D. -1.6 N.D.
carbon source pyruvate (C) -0.1 +0.0 N.D. -1.8 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.2 +0.1 N.D. -1.6 N.D.
carbon source D-Glucose (C) +0.1 -0.8 N.D. -1.0 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 -0.9 N.D. -0.9 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.3 -0.1 N.D. -1.7 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.2 -0.0 N.D. -1.7 N.D.
carbon source D-Glucose (C) +0.1 +0.1 N.D. -1.6 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.1 +0.3 N.D. -1.7 N.D.
carbon source L-Aspartic Acid (C) +0.1 +0.3 N.D. -1.6 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.8 N.D. +0.7 N.D.
carbon source L-Aspartic Acid (C) +0.3 +0.5 N.D. -1.1 N.D.
carbon source succinate (C) -0.4 -0.9 N.D. +1.2 N.D.
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 -1.1 N.D. +1.1 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 -0.7 N.D. +1.1 N.D.
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 -0.4 N.D. +1.2 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.2 -0.5 N.D. +1.5 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 -0.8 N.D. +1.8 N.D.
smsa no antibiotic control SMSA no antibiotic control +0.3 -0.4 N.D. +1.0 N.D.
carbon source L-Glutamic (C) -0.6 +0.1 N.D. +1.6 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.3 -0.4 N.D. +1.3 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.5 -0.5 N.D. +1.6 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.4 +0.7 N.D. +1.1 N.D.
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