Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS14055 and RS_RS14060 are separated by 47 nucleotidesRS_RS14060 and RS_RS14065 are separated by 85 nucleotidesRS_RS14065 and RS_RS14070 are separated by 30 nucleotidesRS_RS14070 and RS_RS14075 are separated by 64 nucleotides RS_RS14055: RS_RS14055 - signal recognition particle protein, at 3,024,633 to 3,026,063 _RS14055 RS_RS14060: RS_RS14060 - hypoxanthine-guanine phosphoribosyltransferase, at 3,026,111 to 3,026,659 _RS14060 RS_RS14065: RS_RS14065 - MarC family protein, at 3,026,745 to 3,027,338 _RS14065 RS_RS14070: RS_RS14070 - 2-oxoglutarate-dependent dioxygenase, at 3,027,369 to 3,028,238 _RS14070 RS_RS14075: RS_RS14075 - lytic transglycosylase, at 3,028,303 to 3,029,040 _RS14075
Group Condition RS_RS14055 RS_RS14060 RS_RS14065 RS_RS14070 RS_RS14075
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.2 N.D. -1.4 -0.3
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.0 N.D. -0.8 -1.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.4 N.D. -1.0 -0.3
carbon source Sucrose (C) N.D. -0.5 N.D. -0.7 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.3 N.D. -0.9 -0.1
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. +0.2 N.D. -1.0 -0.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.2 N.D. -1.2 +0.2
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. -0.5 N.D. -0.3 -0.4
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.1 N.D. -0.3 -1.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.0 N.D. -0.7 -0.5
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. +0.3 N.D. -0.9 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.3 N.D. -0.5 -0.5
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.0 N.D. -0.9 +0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.3 N.D. -0.7 +0.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.4 N.D. -0.7 +0.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.4 N.D. -0.7 -0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.3 N.D. -0.6 +0.5
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.8 N.D. -1.0 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. +0.2 N.D. -0.8 +0.2
carbon source succinate (C) N.D. +0.5 N.D. -0.6 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.2 N.D. -0.7 +0.3
carbon source D-Galactose (C) N.D. +0.5 N.D. -0.4 -0.3
carbon source D-Galactose (C) N.D. +0.2 N.D. -0.4 +0.6
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.1 N.D. -0.4 +0.9
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.5 N.D. -0.6 +0.6
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +0.8 N.D. -0.7 +0.4
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +0.8 N.D. -0.8 +0.9
carbon source pyruvate (C) N.D. +0.7 N.D. -0.5 +0.8
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. +0.1 N.D. +0.5 +0.6
carbon source D,L-Malic Acid (C) N.D. +0.2 N.D. +1.4 +0.5
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