Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS14015 and RS_RS14020 are separated by 105 nucleotidesRS_RS14020 and RS_RS14025 are separated by 150 nucleotidesRS_RS14025 and RS_RS14030 are separated by 436 nucleotidesRS_RS14030 and RS_RS14035 overlap by 8 nucleotides RS_RS14015: RS_RS14015 - DUF2817 domain-containing protein, at 3,012,936 to 3,014,018 _RS14015 RS_RS14020: RS_RS14020 - ribonucleotide-diphosphate reductase subunit beta, at 3,014,124 to 3,015,326 _RS14020 RS_RS14025: RS_RS14025 - ribonucleoside-diphosphate reductase subunit alpha, at 3,015,477 to 3,018,440 _RS14025 RS_RS14030: RS_RS14030 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 3,018,877 to 3,019,479 _RS14030 RS_RS14035: RS_RS14035 - sigma-54-dependent Fis family transcriptional regulator, at 3,019,472 to 3,021,154 _RS14035
Group Condition RS_RS14015 RS_RS14020 RS_RS14025 RS_RS14030 RS_RS14035
carbon source pyruvate (C) -0.3 N.D. N.D. N.D. -2.2
carbon source L-Aspartic Acid (C) -0.2 N.D. N.D. N.D. -2.2
carbon source D-Glucose (C) +0.0 N.D. N.D. N.D. -2.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.0 N.D. N.D. N.D. -1.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin +0.0 N.D. N.D. N.D. -1.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride +0.1 N.D. N.D. N.D. -1.6
carbon source L-Glutamic (C) -0.1 N.D. N.D. N.D. -1.4
carbon source L-Glutamine (C) -0.1 N.D. N.D. N.D. -1.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride -0.3 N.D. N.D. N.D. -1.0
carbon source D-Galactose (C) +0.1 N.D. N.D. N.D. -1.3
carbon source D,L-Malic Acid (C) +0.3 N.D. N.D. N.D. -1.4
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days +0.2 N.D. N.D. N.D. -1.0
carbon source L-Alanine (C) +1.1 N.D. N.D. N.D. -1.2
carbon source succinate (C) -0.6 N.D. N.D. N.D. +0.8
carbon source L-Glutamic (C) -0.3 N.D. N.D. N.D. +0.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.3 N.D. N.D. N.D. +1.0
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.6 N.D. N.D. N.D. -0.9
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 N.D. N.D. N.D. +1.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.2 N.D. N.D. N.D. +1.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 N.D. N.D. N.D. +1.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.5 N.D. N.D. N.D. +1.0
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 N.D. N.D. N.D. +1.3
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 N.D. N.D. N.D. +1.4
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.2 N.D. N.D. N.D. +0.5
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. N.D. N.D. +1.7
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +1.7 N.D. N.D. N.D. +0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 N.D. N.D. N.D. +2.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. N.D. N.D. +2.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.4 N.D. N.D. N.D. +2.7
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.3 N.D. N.D. N.D. +2.8
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