Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS14010 and RS_RS14015 are separated by 26 nucleotidesRS_RS14015 and RS_RS14020 are separated by 105 nucleotidesRS_RS14020 and RS_RS14025 are separated by 150 nucleotidesRS_RS14025 and RS_RS14030 are separated by 436 nucleotides RS_RS14010: RS_RS14010 - EamA family transporter, at 3,012,073 to 3,012,909 _RS14010 RS_RS14015: RS_RS14015 - DUF2817 domain-containing protein, at 3,012,936 to 3,014,018 _RS14015 RS_RS14020: RS_RS14020 - ribonucleotide-diphosphate reductase subunit beta, at 3,014,124 to 3,015,326 _RS14020 RS_RS14025: RS_RS14025 - ribonucleoside-diphosphate reductase subunit alpha, at 3,015,477 to 3,018,440 _RS14025 RS_RS14030: RS_RS14030 - 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD, at 3,018,877 to 3,019,479 _RS14030
Group Condition RS_RS14010 RS_RS14015 RS_RS14020 RS_RS14025 RS_RS14030
carbon source L-Aspartic Acid (C) -1.2 -0.2 N.D. N.D. N.D.
carbon source pyruvate (C) -1.1 -0.3 N.D. N.D. N.D.
carbon source D-Glucose (C) -1.4 +0.0 N.D. N.D. N.D.
carbon source L-Glutamic (C) -1.2 -0.1 N.D. N.D. N.D.
carbon source L-Glutamine (C) -1.1 -0.1 N.D. N.D. N.D.
carbon source D-Galactose (C) -1.2 +0.1 N.D. N.D. N.D.
carbon source L-Glutamic (C) -0.6 -0.3 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.8 -0.0 N.D. N.D. N.D.
carbon source succinate (C) -0.1 -0.6 N.D. N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.5 -0.2 N.D. N.D. N.D.
carbon source L-Alanine (C) -0.2 -0.5 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.5 +0.5 N.D. N.D. N.D.
carbon source L-Glutamine (C) -0.5 +0.5 N.D. N.D. N.D.
carbon source L-Glutamic (C) -0.5 +0.5 N.D. N.D. N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.3 +0.4 N.D. N.D. N.D.
survival water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days +0.6 -0.4 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.6 -0.2 N.D. N.D. N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.2 +0.5 N.D. N.D. N.D.
carbon source succinate (C) -0.1 +0.5 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.4 +0.2 N.D. N.D. N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet +0.3 +0.5 N.D. N.D. N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.3 N.D. N.D. N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 +0.3 N.D. N.D. N.D.
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 +0.2 N.D. N.D. N.D.
carbon source L-Alanine (C) -0.1 +1.1 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.6 +0.4 N.D. N.D. N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +1.0 +0.1 N.D. N.D. N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 +1.2 N.D. N.D. N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.2 +1.7 N.D. N.D. N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 +1.6 N.D. N.D. N.D.
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