Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS13930 and RS_RS13935 are separated by 135 nucleotidesRS_RS13935 and RS_RS13940 are separated by 136 nucleotidesRS_RS13940 and RS_RS13945 are separated by 14 nucleotidesRS_RS13945 and RS_RS13950 are separated by 86 nucleotides RS_RS13930: RS_RS13930 - 3-dehydroquinate dehydratase 1, at 2,995,991 to 2,996,461 _RS13930 RS_RS13935: RS_RS13935 - acetyl-CoA carboxylase biotin carboxyl carrier protein, at 2,996,597 to 2,997,064 _RS13935 RS_RS13940: RS_RS13940 - acetyl-CoA carboxylase biotin carboxylase subunit, at 2,997,201 to 2,998,571 _RS13940 RS_RS13945: RS_RS13945 - 50S ribosomal protein L11 methyltransferase, at 2,998,586 to 2,999,482 _RS13945 RS_RS13950: RS_RS13950 - DUF3426 domain-containing protein, at 2,999,569 to 3,000,990 _RS13950
Group Condition RS_RS13930 RS_RS13935 RS_RS13940 RS_RS13945 RS_RS13950
carbon source L-Glutamic (C) N.D. N.D. N.D. -2.5 +0.1
carbon source D-Glucose (C) N.D. N.D. N.D. -1.3 -0.5
carbon source D,L-Malic Acid (C) N.D. N.D. N.D. -1.1 -0.6
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. N.D. N.D. -1.0 -0.6
carbon source pyruvate (C) N.D. N.D. N.D. -1.0 -0.3
carbon source D-Galactose (C) N.D. N.D. N.D. -1.0 -0.0
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. -0.5 -0.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. -1.0 -0.0
carbon source L-Glutamine (C) N.D. N.D. N.D. -0.8 -0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. N.D. -0.1 -0.9
carbon source L-Aspartic Acid (C) N.D. N.D. N.D. -0.3 -0.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. N.D. -0.4 -0.6
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.2 -0.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. N.D. -0.7 -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. N.D. N.D. -1.0 +0.1
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days N.D. N.D. N.D. -0.6 -0.2
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.4 -0.4
carbon source L-Glutamine (C) N.D. N.D. N.D. -0.5 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.4 -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. -0.5 -0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. N.D. N.D. -0.7 +0.2
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. N.D. -0.7 +0.3
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. N.D. -0.6 +0.4
carbon source D-Galactose (C) N.D. N.D. N.D. -0.5 +0.4
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. N.D. N.D. +0.4 -0.5
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. -0.3 +0.6
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. N.D. N.D. -0.2 +0.5
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. +0.6 +0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. +0.5 +0.3
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. +0.3 +1.2
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