Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS13745 and RS_RS13750 are separated by 75 nucleotidesRS_RS13750 and RS_RS13755 are separated by 354 nucleotidesRS_RS13755 and RS_RS13760 are separated by 73 nucleotidesRS_RS13760 and RS_RS13765 are separated by 113 nucleotides RS_RS13745: RS_RS13745 - ferric iron uptake transcriptional regulator, at 2,957,842 to 2,958,273 _RS13745 RS_RS13750: RS_RS13750 - transcriptional regulator, at 2,958,349 to 2,959,392 _RS13750 RS_RS13755: RS_RS13755 - aldehyde dehydrogenase, at 2,959,747 to 2,960,745 _RS13755 RS_RS13760: RS_RS13760 - transketolase, at 2,960,819 to 2,962,846 _RS13760 RS_RS13765: RS_RS13765 - D-galactonate dehydratase, at 2,962,960 to 2,964,108 _RS13765
Group Condition RS_RS13745 RS_RS13750 RS_RS13755 RS_RS13760 RS_RS13765
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -15.4 N.D. N.D. +0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -12.3 N.D. N.D. -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -6.1 N.D. N.D. +0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -5.6 N.D. N.D. +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -4.1 N.D. N.D. +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -4.2 N.D. N.D. +0.2
carbon source D-Galactose (C) N.D. +4.5 N.D. N.D. -5.0
carbon source D-Galactose (C) N.D. +4.5 N.D. N.D. -3.7
carbon source D-Glucose (C) N.D. +4.0 N.D. N.D. -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +4.1 N.D. N.D. -0.1
carbon source L-Glutamine (C) N.D. +4.3 N.D. N.D. -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. +4.3 N.D. N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +4.4 N.D. N.D. -0.0
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +4.6 N.D. N.D. -0.3
carbon source L-Glutamic (C) N.D. +4.5 N.D. N.D. -0.1
carbon source L-Glutamine (C) N.D. +4.6 N.D. N.D. -0.1
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +4.3 N.D. N.D. +0.2
carbon source D,L-Malic Acid (C) N.D. +4.7 N.D. N.D. -0.2
carbon source L-Glutamic (C) N.D. +4.4 N.D. N.D. +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +4.9 N.D. N.D. -0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. +4.8 N.D. N.D. -0.2
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. +4.6 N.D. N.D. +0.2
carbon source Sucrose (C) N.D. +5.2 N.D. N.D. -0.3
carbon source L-Glutamic (C) N.D. +4.6 N.D. N.D. +0.4
carbon source succinate (C) N.D. +4.7 N.D. N.D. +0.3
carbon source Sucrose (C) N.D. +4.9 N.D. N.D. +0.1
carbon source succinate (C) N.D. +5.3 N.D. N.D. +0.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. +5.7 N.D. N.D. -0.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +5.8 N.D. N.D. -0.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. +6.3 N.D. N.D. +0.2
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