Fitness for 5 genes in Ralstonia solanacearum GMI1000

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Top 30 experiments (either direction), sorted by average fitness

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500 ntRS_RS13730 and RS_RS13735 are separated by 178 nucleotidesRS_RS13735 and RS_RS13740 are separated by 101 nucleotidesRS_RS13740 and RS_RS13745 are separated by 150 nucleotidesRS_RS13745 and RS_RS13750 are separated by 75 nucleotides RS_RS13730: RS_RS13730 - leucine--tRNA ligase, at 2,953,327 to 2,955,960 _RS13730 RS_RS13735: RS_RS13735 - 4-hydroxy-tetrahydrodipicolinate reductase, at 2,956,139 to 2,956,930 _RS13735 RS_RS13740: RS_RS13740 - outer membrane protein assembly factor BamE, at 2,957,032 to 2,957,691 _RS13740 RS_RS13745: RS_RS13745 - ferric iron uptake transcriptional regulator, at 2,957,842 to 2,958,273 _RS13745 RS_RS13750: RS_RS13750 - transcriptional regulator, at 2,958,349 to 2,959,392 _RS13750
Group Condition RS_RS13730 RS_RS13735 RS_RS13740 RS_RS13745 RS_RS13750
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. N.D. N.D. -15.4
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. N.D. N.D. -12.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. N.D. N.D. -6.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. N.D. N.D. N.D. -5.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. N.D. N.D. -4.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. N.D. N.D. -4.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. N.D. N.D. -4.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. N.D. N.D. +4.1
carbon source L-Glutamine (C) N.D. N.D. N.D. N.D. +4.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol_and_CrystalViolet N.D. N.D. N.D. N.D. +4.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. N.D. N.D. +4.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. N.D. N.D. +4.4
carbon source L-Glutamic (C) N.D. N.D. N.D. N.D. +4.4
carbon source D-Galactose (C) N.D. N.D. N.D. N.D. +4.5
carbon source L-Glutamic (C) N.D. N.D. N.D. N.D. +4.5
carbon source D-Galactose (C) N.D. N.D. N.D. N.D. +4.5
carbon source L-Glutamine (C) N.D. N.D. N.D. N.D. +4.6
carbon source L-Glutamic (C) N.D. N.D. N.D. N.D. +4.6
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. N.D. +4.6
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. N.D. +4.6
carbon source D,L-Malic Acid (C) N.D. N.D. N.D. N.D. +4.7
carbon source succinate (C) N.D. N.D. N.D. N.D. +4.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride N.D. N.D. N.D. N.D. +4.8
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. N.D. +4.9
carbon source Sucrose (C) N.D. N.D. N.D. N.D. +4.9
carbon source Sucrose (C) N.D. N.D. N.D. N.D. +5.2
carbon source succinate (C) N.D. N.D. N.D. N.D. +5.3
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet N.D. N.D. N.D. N.D. +5.7
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. N.D. +5.8
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. N.D. +6.3
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