Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS13690 and RS_RS13695 are separated by 8 nucleotidesRS_RS13695 and RS_RS13700 are separated by 61 nucleotidesRS_RS13700 and RS_RS13705 are separated by 24 nucleotidesRS_RS13705 and RS_RS13710 are separated by 21 nucleotides RS_RS13690: RS_RS13690 - two-component sensor histidine kinase, at 2,944,831 to 2,946,159 _RS13690 RS_RS13695: RS_RS13695 - hybrid sensor histidine kinase/response regulator, at 2,946,168 to 2,947,292 _RS13695 RS_RS13700: RS_RS13700 - response regulator, at 2,947,354 to 2,948,364 _RS13700 RS_RS13705: RS_RS13705 - class I SAM-dependent RNA methyltransferase, at 2,948,389 to 2,949,804 _RS13705 RS_RS13710: RS_RS13710 - membrane protein, at 2,949,826 to 2,950,248 _RS13710
Group Condition RS_RS13690 RS_RS13695 RS_RS13700 RS_RS13705 RS_RS13710
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.7 -2.9 -0.0 -2.0 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.6 -2.6 +0.0 -1.9 N.D.
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.4 -3.2 +0.5 -0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.0 -2.5 +0.6 -0.3 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -1.8 -2.1 +0.2 -0.3 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.1 -2.7 +0.4 +0.4 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.1 -2.7 -0.2 +1.3 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.7 -2.9 -0.1 +0.0 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -1.3 -2.1 +0.0 -0.1 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.5 -2.1 +0.2 -0.0 N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.8 -1.9 -0.0 +0.4 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -1.4 -1.5 +0.2 -0.4 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -1.1 -1.3 +0.2 -0.7 N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.4 -1.6 +0.4 -0.2 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.3 -2.1 -0.5 +0.0 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.4 -1.5 +0.2 -0.8 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -1.2 -1.5 +0.4 -0.1 N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 -1.8 +0.3 -0.3 N.D.
carbon source D-Glucose (C) +0.3 +1.2 -1.3 -1.7 N.D.
carbon source D-Galactose (C) +1.6 +1.8 -0.9 -0.1 N.D.
carbon source succinate (C) +1.0 +1.3 +0.4 +0.2 N.D.
carbon source D-Glucose (C) +0.6 +1.4 +0.2 +0.8 N.D.
carbon source pyruvate (C) +0.6 +1.3 +0.3 +0.9 N.D.
m63_quarter_strength M63_quarter_strength +1.2 +1.5 -0.0 +0.4 N.D.
carbon source succinate (C) +0.9 +1.8 +0.3 +0.3 N.D.
carbon source D-Galactose (C) +1.6 +1.7 +0.5 -0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +1.5 +1.5 +0.2 +0.4 N.D.
carbon source L-Alanine (C) +1.9 +1.6 +0.1 +0.3 N.D.
carbon source L-Glutamine (C) +1.4 +1.6 +0.3 +0.6 N.D.
carbon source L-Glutamine (C) +1.9 +1.8 +0.6 +0.0 N.D.
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