Fitness for 5 genes in Ralstonia solanacearum GMI1000

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RS_RS13230	RS_RS13235	RS_RS13240	RS_RS13245	RS_RS13250
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	+0.0	N.D.	-0.0	-4.4	+0.9
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+0.2	N.D.	-0.4	-1.8	-0.3
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	-0.2	N.D.	+0.1	-1.4	-0.5
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.2	N.D.	-0.5	-1.0	+0.1
in planta	Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi	+0.5	N.D.	-0.1	-2.0	+0.5
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-1.8	N.D.	-0.4	-0.0	+1.0
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	+0.3	N.D.	+0.1	-0.9	-0.7
carbon source	D,L-Malic Acid (C)	+0.3	N.D.	-0.0	-1.5	+0.2
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.1	N.D.	+0.1	-1.3	+0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin	+0.2	N.D.	+0.0	-1.7	+0.7
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-0.7	N.D.	+0.1	-0.8	+0.5
in planta	Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi	-0.1	N.D.	+0.4	-1.2	+0.2
in planta	Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+0.4	N.D.	+0.2	-1.0	-0.2
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-1.5	N.D.	-0.5	+1.0	+0.6
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-0.9	N.D.	-0.2	+0.2	+0.7
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	+0.1	N.D.	+0.1	-0.9	+0.7
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-1.6	N.D.	-0.1	+1.0	+0.8
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-1.2	N.D.	-0.1	+1.1	+0.3
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-1.3	N.D.	-0.5	+1.2	+0.9
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	+0.3	N.D.	-0.3	+1.0	-0.1
carbon source	succinate (C)	-0.1	N.D.	-0.1	-0.5	+1.8
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.5	N.D.	+0.0	+0.3	+1.3
in planta	Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.2	N.D.	+0.8	-0.7	+1.6
carbon source	succinate (C)	+0.2	N.D.	+0.5	+0.6	+0.5
in planta	Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.7	N.D.	+1.0	-0.3	+1.8
carbon source	Sucrose (C)	+0.1	N.D.	+0.1	-0.0	+1.7
carbon source	L-Glutamine (C)	+0.2	N.D.	+0.2	+0.7	+0.8
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	+0.1	N.D.	+0.6	+0.7	+0.7
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.1	N.D.	+0.6	+0.8	+1.4
in planta	Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	+0.3	N.D.	+0.6	+0.8	+1.9