Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS12095 and RS_RS12100 are separated by 13 nucleotidesRS_RS12100 and RS_RS12105 are separated by 128 nucleotidesRS_RS12105 and RS_RS12110 are separated by 80 nucleotidesRS_RS12110 and RS_RS12115 overlap by 4 nucleotides RS_RS12095: RS_RS12095 - prolipoprotein diacylglyceryl transferase, at 2,614,791 to 2,615,702 _RS12095 RS_RS12100: RS_RS12100 - LysR family transcriptional regulator, at 2,615,716 to 2,616,651 _RS12100 RS_RS12105: RS_RS12105 - dihydroxy-acid dehydratase, at 2,616,780 to 2,618,453 _RS12105 RS_RS12110: RS_RS12110 - DUF2486 domain-containing protein, at 2,618,534 to 2,618,965 _RS12110 RS_RS12115: RS_RS12115 - DNA polymerase III subunit chi, at 2,618,962 to 2,619,390 _RS12115
Group Condition RS_RS12095 RS_RS12100 RS_RS12105 RS_RS12110 RS_RS12115
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -1.0 N.D. N.D. -3.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.6 N.D. N.D. -3.7
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.7 N.D. N.D. -2.0
survival water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days N.D. -0.3 N.D. N.D. -2.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -1.1 N.D. N.D. -1.3
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.4 N.D. N.D. -1.9
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.4 N.D. N.D. -1.9
m63_quarter_strength M63_quarter_strength N.D. +0.2 N.D. N.D. -2.4
carbon source pyruvate (C) N.D. -0.2 N.D. N.D. -2.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.3 N.D. N.D. -1.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.1 N.D. N.D. -2.0
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.4 N.D. N.D. -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.1 N.D. N.D. -1.8
carbon source L-Glutamine (C) N.D. -2.1 N.D. N.D. +0.2
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. -0.3 N.D. N.D. -1.5
carbon source D-Glucose (C) N.D. -1.6 N.D. N.D. -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.0 N.D. N.D. -1.7
carbon source Sucrose (C) N.D. +0.3 N.D. N.D. -2.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.0 N.D. N.D. -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. -0.3 N.D. N.D. -1.2
carbon source Sucrose (C) N.D. -1.7 N.D. N.D. +0.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. +0.1 N.D. N.D. -1.5
carbon source L-Alanine (C) N.D. +0.4 N.D. N.D. -1.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. +0.8 N.D. N.D. -1.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +0.8 N.D. N.D. -0.9
carbon source L-Alanine (C) N.D. +1.2 N.D. N.D. -0.7
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.4 N.D. N.D. +1.4
carbon source L-Aspartic Acid (C) N.D. +2.1 N.D. N.D. -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet N.D. -0.0 N.D. N.D. +2.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.0 N.D. N.D. +2.5
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