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Protein
Homologs
Fitness for 5 genes in
Ralstonia solanacearum GMI1000
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
RS_RS11930 and RS_RS11935 are separated by 86 nucleotides
RS_RS11935 and RS_RS11940 are separated by 21 nucleotides
RS_RS11940 and RS_RS11945 are separated by 8 nucleotides
RS_RS11945 and RS_RS11950 are separated by 205 nucleotides
RS_RS11930: RS_RS11930 - 4Fe-4S dicluster domain-containing protein, at 2,579,650 to 2,581,809
_RS11930
RS_RS11935: RS_RS11935 - DUF3306 domain-containing protein, at 2,581,896 to 2,582,465
_RS11935
RS_RS11940: RS_RS11940 - DUF3305 domain-containing protein, at 2,582,487 to 2,583,008
_RS11940
RS_RS11945: RS_RS11945 - iron-sulfur cluster carrier protein ApbC, at 2,583,017 to 2,584,105
_RS11945
RS_RS11950: RS_RS11950 - OmpA family lipoprotein, at 2,584,311 to 2,584,940
_RS11950
Group
Condition
RS
_RS11930
RS
_RS11935
RS
_RS11940
RS
_RS11945
RS
_RS11950
carbon source
L-Alanine (C)
-0.4
-0.0
+0.0
-3.4
+0.1
carbon source
D-Glucose (C)
-0.0
-0.6
+0.1
-3.2
+0.1
carbon source
L-Aspartic Acid (C)
-0.3
+0.3
-0.3
-3.6
+0.4
carbon source
D-Glucose (C)
-0.6
+0.1
+0.0
-2.9
+0.0
carbon source
L-Aspartic Acid (C)
-0.0
-0.4
+0.2
-3.1
+0.6
carbon source
L-Glutamine (C)
-0.4
-0.1
-0.1
-2.7
+0.7
carbon source
pyruvate (C)
+0.0
+0.1
+0.7
-2.7
-0.6
carbon source
pyruvate (C)
+0.1
+0.1
+0.1
-3.3
+0.9
carbon source
D-Galactose (C)
-0.3
-0.2
+0.7
-2.4
+0.1
carbon source
succinate (C)
-0.0
-0.4
+0.2
-2.1
+1.3
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted
-0.2
-0.8
+0.4
-1.6
+1.1
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems
-0.3
-0.7
+0.3
-1.4
+1.1
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.2
+0.2
+0.1
-2.4
+1.8
in planta
Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.2
-0.1
-0.6
-1.2
+2.0
in planta
Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
-0.2
-0.2
-0.1
-1.3
+2.0
in planta
Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.1
-0.2
-0.0
-2.3
+2.9
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.1
-1.1
-0.0
-1.1
+3.0
in planta
Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.1
-0.1
-0.1
-1.8
+3.0
in planta
Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
-0.3
+0.2
+0.0
-1.3
+2.7
in planta
Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted
-0.1
-0.3
+0.5
-0.7
+2.0
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.1
-0.2
-0.0
-1.0
+3.0
in planta
Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.4
-0.1
-0.6
-1.0
+3.2
in planta
Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.1
+0.3
+0.7
-1.9
+2.9
in planta
Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.2
+0.1
+0.0
-0.7
+2.7
in planta
Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi
+0.1
+0.4
+0.0
-0.8
+2.5
in planta
Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
+0.2
+0.5
+0.1
-1.1
+2.8
in planta
Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.3
-0.5
+0.2
+0.9
+3.3
in planta
Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct
-0.1
+0.3
+0.2
+0.2
+3.6
in planta
Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.4
-0.0
+1.5
+3.2
in planta
Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
+0.1
-0.0
-0.2
+1.2
+4.6
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