Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS11330 and RS_RS11335 are separated by 44 nucleotidesRS_RS11335 and RS_RS11340 overlap by 4 nucleotidesRS_RS11340 and RS_RS11345 overlap by 4 nucleotidesRS_RS11345 and RS_RS11350 are separated by 103 nucleotides RS_RS11330: RS_RS11330 - amino acid ABC transporter substrate-binding protein, at 2,449,466 to 2,450,320 _RS11330 RS_RS11335: RS_RS11335 - amino acid ABC transporter permease, at 2,450,365 to 2,451,060 _RS11335 RS_RS11340: RS_RS11340 - amino acid ABC transporter permease, at 2,451,057 to 2,451,755 _RS11340 RS_RS11345: RS_RS11345 - amino acid ABC transporter ATP-binding protein, at 2,451,752 to 2,452,501 _RS11345 RS_RS11350: RS_RS11350 - amino acid ABC transporter substrate-binding protein, at 2,452,605 to 2,453,531 _RS11350
Group Condition RS_RS11330 RS_RS11335 RS_RS11340 RS_RS11345 RS_RS11350
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.3 -0.8 N.D. -1.6
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.3 -1.0 N.D. -0.7
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.9 -0.8 N.D. +0.4
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.5 -0.6 N.D. -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.3 -0.3 N.D. -0.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.7 -0.3 N.D. +0.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 -0.2 N.D. -0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -0.6 -0.2 N.D. +0.0
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.4 -1.0 N.D. +0.6
m63_quarter_strength M63_quarter_strength N.D. +0.1 -0.2 N.D. -0.7
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. +0.2 -0.2 N.D. -0.6
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.6 -0.4 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin N.D. +0.3 -0.1 N.D. -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.6 +0.2 N.D. +0.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.8 -0.1 N.D. +0.5
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. -0.5 -0.1 N.D. +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.6 -0.3 N.D. +0.6
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.3 -0.4 N.D. +0.7
cpg CPG N.D. +0.0 -0.5 N.D. +0.5
carbon source D,L-Malic Acid (C) N.D. +0.1 +0.4 N.D. -0.4
carbon source L-Glutamine (C) N.D. +0.5 +0.1 N.D. -0.5
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. +0.1 -0.3 N.D. +0.6
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. -0.3 +0.2 N.D. +0.6
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.4 +0.4 N.D. +0.6
carbon source pyruvate (C) N.D. +0.0 +0.1 N.D. +0.8
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. +0.1 +0.3 N.D. +0.5
carbon source D-Glucose (C) N.D. -0.0 +0.9 N.D. +0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. -0.0 +0.2 N.D. +0.8
carbon source Sucrose (C) N.D. +0.3 +0.3 N.D. +0.5
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. +0.1 +0.2 N.D. +0.9
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