Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS11265 and RS_RS11270 are separated by 4 nucleotidesRS_RS11270 and RS_RS11275 overlap by 8 nucleotidesRS_RS11275 and RS_RS11280 overlap by 4 nucleotidesRS_RS11280 and RS_RS11285 overlap by 4 nucleotides RS_RS11265: RS_RS11265 - ABC transporter substrate-binding protein, at 2,437,404 to 2,438,582 _RS11265 RS_RS11270: RS_RS11270 - ABC transporter ATP-binding protein, at 2,438,587 to 2,439,288 _RS11270 RS_RS11275: RS_RS11275 - ABC transporter ATP-binding protein, at 2,439,281 to 2,440,054 _RS11275 RS_RS11280: RS_RS11280 - branched-chain amino acid ABC transporter permease, at 2,440,051 to 2,441,076 _RS11280 RS_RS11285: RS_RS11285 - branched-chain amino acid ABC transporter permease, at 2,441,073 to 2,441,942 _RS11285
Group Condition RS_RS11265 RS_RS11270 RS_RS11275 RS_RS11280 RS_RS11285
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.9 N.D. N.D. -0.1 +0.2
carbon source L-Aspartic Acid (C) -0.2 N.D. N.D. -2.0 -0.1
carbon source D-Glucose (C) +0.2 N.D. N.D. -1.6 -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.6 N.D. N.D. -0.7 -0.2
carbon source L-Glutamic (C) +0.1 N.D. N.D. -1.4 -0.1
carbon source succinate (C) -0.6 N.D. N.D. -0.6 -0.0
m63_quarter_strength M63_quarter_strength -0.2 N.D. N.D. -0.7 -0.2
carbon source L-Alanine (C) -0.7 N.D. N.D. +0.1 -0.4
carbon source L-Aspartic Acid (C) -0.2 N.D. N.D. -0.7 -0.1
cpg CPG -0.7 N.D. N.D. -0.3 -0.0
carbon source pyruvate (C) +0.0 N.D. N.D. -0.9 -0.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_Chloramphenicol -0.3 N.D. N.D. -0.3 -0.4
carbon source D-Galactose (C) +0.1 N.D. N.D. -0.8 -0.2
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 N.D. N.D. -0.5 +0.3
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.5 N.D. N.D. -0.9 -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.3 N.D. N.D. -0.8 -0.0
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -1.0 N.D. N.D. +0.6 -0.0
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.9 N.D. N.D. +0.5 +0.1
carbon source L-Alanine (C) +0.4 N.D. N.D. -0.5 -0.1
carbon source D-Glucose (C) -0.1 N.D. N.D. +0.7 -0.2
survival water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days +0.5 N.D. N.D. +0.2 -0.3
carbon source L-Aspartic Acid (C) -0.5 N.D. N.D. +0.9 +0.2
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 N.D. N.D. -0.3 +0.4
carbon source pyruvate (C) -0.1 N.D. N.D. +0.8 +0.1
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.9 N.D. N.D. -0.3 +0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.3 N.D. N.D. +0.6 +0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.7 N.D. N.D. +0.2 +0.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +1.1 N.D. N.D. +0.2 -0.0
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 N.D. N.D. +0.7 +0.2
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 N.D. N.D. +0.6 -0.0
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