Fitness for 5 genes in Ralstonia solanacearum GMI1000

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RS_RS11055	RS_RS11060	RS_RS11065	RS_RS11070	RS_RS11075
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	-3.9	-3.1	N.D.	+0.5	-0.5
stress	SMSA with Ralstonia_antibiotic_mix_minus_Penicillin	-3.1	-3.6	N.D.	-0.4	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	-2.6	-4.0	N.D.	-0.1	+0.1
stress	SMSA with Ralstonia_antibiotic_mix	-2.0	-3.2	N.D.	+0.4	-0.6
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	-2.6	-2.8	N.D.	+0.3	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	-1.9	-3.5	N.D.	-0.1	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol	-2.4	-2.2	N.D.	+0.3	-0.2
stress	SMSA with Ralstonia_antibiotic_mix	-2.3	-1.8	N.D.	+0.1	+0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_Bacitracin	-2.4	-1.5	N.D.	+0.5	-0.2
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-2.1	-1.7	N.D.	-0.1	+0.1
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-1.5	-2.1	N.D.	-0.1	+0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol	-1.2	-1.8	N.D.	-0.3	+0.1
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.9	-2.1	N.D.	+0.4	-0.4
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	-1.8	-1.5	N.D.	+0.1	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol_and_CrystalViolet	-3.3	+0.0	N.D.	+0.1	+0.3
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-1.2	-2.0	N.D.	+0.1	+0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	-0.9	-2.2	N.D.	+0.1	+0.1
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-1.2	-1.0	N.D.	-0.4	-0.2
stress	SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet	-1.2	-1.8	N.D.	+0.5	-0.3
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted	-1.1	-1.2	N.D.	-0.2	-0.1
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	-0.8	-0.8	N.D.	-1.0	+0.1
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	-0.2	-0.3	N.D.	-2.1	+0.2
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-0.8	-1.4	N.D.	+0.0	-0.1
stress	SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet	-2.0	-0.8	N.D.	+0.3	+0.3
in planta	Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-1.4	-1.1	N.D.	+1.0	-0.2
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-1.5	-0.9	N.D.	+0.4	+0.4
in planta	Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.5	-1.5	N.D.	+0.5	-0.1
in planta	Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.9	-0.4	N.D.	+1.3	+0.1
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	+1.2	+0.8	N.D.	-0.5	-0.1
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	+0.9	+1.2	N.D.	+0.2	+0.3