Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS10645 and RS_RS10650 are separated by 113 nucleotidesRS_RS10650 and RS_RS10655 are separated by 292 nucleotidesRS_RS10655 and RS_RS10660 are separated by 163 nucleotidesRS_RS10660 and RS_RS10665 are separated by 49 nucleotides RS_RS10645: RS_RS10645 - porin, at 2,298,642 to 2,298,911 _RS10645 RS_RS10650: RS_RS10650 - NADP-dependent malic enzyme, at 2,299,025 to 2,301,346 _RS10650 RS_RS10655: RS_RS10655 - DUF4136 domain-containing protein, at 2,301,639 to 2,302,280 _RS10655 RS_RS10660: RS_RS10660 - aminopeptidase N, at 2,302,444 to 2,305,161 _RS10660 RS_RS10665: RS_RS10665 - fructose 1,6-bisphosphatase, at 2,305,211 to 2,306,227 _RS10665
Group Condition RS_RS10645 RS_RS10650 RS_RS10655 RS_RS10660 RS_RS10665
carbon source L-Glutamine (C) N.D. -5.1 +0.5 -0.2 N.D.
carbon source L-Glutamic (C) N.D. -4.4 +0.3 -0.5 N.D.
carbon source L-Glutamine (C) N.D. -3.9 +0.2 -0.6 N.D.
carbon source L-Glutamic (C) N.D. -2.8 -0.2 -0.8 N.D.
carbon source L-Glutamic (C) N.D. -3.3 +0.2 -0.6 N.D.
carbon source L-Glutamine (C) N.D. -2.7 -0.3 -0.4 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -1.1 -0.8 -0.0 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. -0.9 -0.8 -0.1 N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.7 -0.4 -0.6 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days N.D. -0.1 +0.0 -1.4 N.D.
carbon source D-Glucose (C) N.D. -0.0 -0.1 -1.4 N.D.
carbon source L-Aspartic Acid (C) N.D. -0.4 +0.0 -1.1 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. -1.3 -0.2 +0.1 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. -1.5 +0.1 -0.0 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.4 -0.1 -0.8 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. -0.4 -0.2 -0.6 N.D.
carbon source succinate (C) N.D. -1.0 +0.1 -0.2 N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.6 -0.6 +0.0 N.D.
carbon source L-Alanine (C) N.D. -0.2 +0.2 -1.0 N.D.
carbon source D,L-Malic Acid (C) N.D. -0.3 +0.4 -1.1 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.9 +0.8 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. -0.2 +0.4 -0.9 N.D.
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.8 -0.3 +0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. -0.1 +0.3 -0.8 N.D.
carbon source pyruvate (C) N.D. +0.3 -0.1 -0.8 N.D.
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.8 +1.0 -0.3 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. -0.8 +0.3 +0.3 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.5 +0.4 +0.3 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. -0.5 +0.7 +0.5 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. -0.6 +0.4 +1.2 N.D.
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