Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS10635 and RS_RS10640 overlap by 4 nucleotidesRS_RS10640 and RS_RS10645 are separated by 32 nucleotidesRS_RS10645 and RS_RS10650 are separated by 113 nucleotidesRS_RS10650 and RS_RS10655 are separated by 292 nucleotides RS_RS10635: RS_RS10635 - allantoinase PuuE, at 2,297,129 to 2,298,091 _RS10635 RS_RS10640: RS_RS10640 - OHCU decarboxylase, at 2,298,088 to 2,298,609 _RS10640 RS_RS10645: RS_RS10645 - porin, at 2,298,642 to 2,298,911 _RS10645 RS_RS10650: RS_RS10650 - NADP-dependent malic enzyme, at 2,299,025 to 2,301,346 _RS10650 RS_RS10655: RS_RS10655 - DUF4136 domain-containing protein, at 2,301,639 to 2,302,280 _RS10655
Group Condition RS_RS10635 RS_RS10640 RS_RS10645 RS_RS10650 RS_RS10655
carbon source L-Glutamine (C) -0.0 N.D. N.D. -5.1 +0.5
carbon source L-Glutamic (C) -0.0 N.D. N.D. -4.4 +0.3
carbon source L-Glutamine (C) +0.2 N.D. N.D. -3.9 +0.2
carbon source L-Glutamic (C) -0.2 N.D. N.D. -2.8 -0.2
carbon source L-Glutamic (C) +0.1 N.D. N.D. -3.3 +0.2
carbon source L-Glutamine (C) +0.2 N.D. N.D. -2.7 -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.2 N.D. N.D. -1.1 -0.8
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.1 N.D. N.D. -0.9 -0.8
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. N.D. -0.9 -0.1
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.2 N.D. N.D. -1.5 +0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.1 N.D. N.D. -1.3 -0.2
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 N.D. N.D. -0.6 -0.6
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 N.D. N.D. -0.8 -0.3
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 N.D. N.D. -0.7 -0.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.2 N.D. N.D. -0.9 -0.0
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -0.2 N.D. N.D. -0.5 -0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.0 N.D. N.D. -1.0 -0.1
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.6 N.D. N.D. -0.5 +0.0
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 N.D. N.D. -0.6 -0.4
carbon source succinate (C) +0.1 N.D. N.D. -1.0 +0.1
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.6 N.D. N.D. -0.9 +0.8
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.3 N.D. N.D. -0.6 +0.3
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.1 N.D. N.D. -0.9 +0.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.5 N.D. N.D. -0.5 +0.4
carbon source succinate (C) +0.1 N.D. N.D. -0.7 +0.2
carbon source Sucrose (C) +0.4 N.D. N.D. -0.6 -0.2
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 N.D. N.D. -0.8 +1.0
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.2 N.D. N.D. -0.8 +0.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 N.D. N.D. -0.6 +0.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 N.D. N.D. -0.5 +0.7
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