Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS10395 and RS_RS10400 are separated by 340 nucleotidesRS_RS10400 and RS_RS10405 are separated by 13 nucleotidesRS_RS10405 and RS_RS10410 are separated by 148 nucleotidesRS_RS10410 and RS_RS10415 are separated by 55 nucleotides RS_RS10395: RS_RS10395 - 2-isopropylmalate synthase, at 2,244,697 to 2,246,238 _RS10395 RS_RS10400: RS_RS10400 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 2,246,579 to 2,247,454 _RS10400 RS_RS10405: RS_RS10405 - phosphatidylserine decarboxylase proenzyme, at 2,247,468 to 2,248,115 _RS10405 RS_RS10410: RS_RS10410 - ketol-acid reductoisomerase, at 2,248,264 to 2,249,280 _RS10410 RS_RS10415: RS_RS10415 - acetolactate synthase small subunit, at 2,249,336 to 2,249,827 _RS10415
Group Condition RS_RS10395 RS_RS10400 RS_RS10405 RS_RS10410 RS_RS10415
carbon source L-Glutamic (C) -2.4 N.D. N.D. N.D. -1.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.0 N.D. N.D. N.D. -2.7
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.2 N.D. N.D. N.D. -2.7
carbon source L-Aspartic Acid (C) -0.7 N.D. N.D. N.D. -1.7
carbon source L-Glutamine (C) -0.9 N.D. N.D. N.D. -1.4
carbon source L-Alanine (C) -0.5 N.D. N.D. N.D. -1.7
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days -0.1 N.D. N.D. N.D. -1.9
m63_quarter_strength M63_quarter_strength -0.1 N.D. N.D. N.D. -1.8
carbon source D-Glucose (C) -0.2 N.D. N.D. N.D. -1.7
carbon source pyruvate (C) +0.1 N.D. N.D. N.D. -1.9
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days +0.1 N.D. N.D. N.D. -2.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.1 N.D. N.D. N.D. -1.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -0.1 N.D. N.D. N.D. -1.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.6 N.D. N.D. N.D. -0.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.1 N.D. N.D. N.D. -1.4
m63_quarter_strength M63_quarter_strength +0.2 N.D. N.D. N.D. -1.5
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 N.D. N.D. N.D. -1.7
carbon source L-Glutamic (C) -2.0 N.D. N.D. N.D. +1.0
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days +0.4 N.D. N.D. N.D. -1.3
carbon source L-Glutamic (C) -1.1 N.D. N.D. N.D. +0.9
carbon source Sucrose (C) -1.1 N.D. N.D. N.D. +1.2
carbon source D-Galactose (C) -0.6 N.D. N.D. N.D. +0.8
carbon source L-Glutamine (C) -0.6 N.D. N.D. N.D. +1.1
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.8 N.D. N.D. N.D. +1.6
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.7 N.D. N.D. N.D. +1.4
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.4 N.D. N.D. N.D. +1.2
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.1 N.D. N.D. N.D. +1.5
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.1 N.D. N.D. N.D. +1.4
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 N.D. N.D. N.D. +1.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.1 N.D. N.D. N.D. +1.9
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