Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS10180 and RS_RS10185 are separated by 8 nucleotidesRS_RS10185 and RS_RS10190 overlap by 50 nucleotidesRS_RS10190 and RS_RS10195 are separated by 2 nucleotidesRS_RS10195 and RS_RS10200 are separated by 16 nucleotides RS_RS10180: RS_RS10180 - urease accessory protein UreG, at 2,204,109 to 2,204,741 _RS10180 RS_RS10185: RS_RS10185 - urease accessory protein UreF, at 2,204,750 to 2,205,481 _RS10185 RS_RS10190: RS_RS10190 - urease accessory protein UreE, at 2,205,432 to 2,206,067 _RS10190 RS_RS10195: RS_RS10195 - urease subunit alpha, at 2,206,070 to 2,207,788 _RS10195 RS_RS10200: RS_RS10200 - urease subunit beta, at 2,207,805 to 2,208,110 _RS10200
Group Condition RS_RS10180 RS_RS10185 RS_RS10190 RS_RS10195 RS_RS10200
carbon source Sucrose (C) -0.2 -0.3 -0.6 -0.2 N.D.
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.5 -0.7 -0.3 +0.2 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days +0.1 -0.5 -0.6 -0.2 N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.3 -0.7 -0.6 +0.4 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days +0.2 -0.7 -0.4 -0.1 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -0.2 -0.3 -0.4 +0.0 N.D.
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days +0.1 -0.9 +0.0 +0.0 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.6 -0.6 -0.4 -0.2 N.D.
carbon source succinate (C) -0.5 +0.3 -0.2 -0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 -0.6 +0.2 +0.2 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.6 +0.2 +0.1 +0.2 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems +0.7 -0.6 +0.1 -0.1 N.D.
in planta Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.0 -0.3 -0.5 +0.8 N.D.
carbon source L-Glutamic (C) -0.1 -0.3 +0.7 -0.0 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.3 -0.3 +0.3 +0.3 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted +0.3 -0.1 +0.5 -0.2 N.D.
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi +0.1 +0.5 +0.3 -0.1 N.D.
carbon source D-Galactose (C) +0.1 +0.3 -0.1 +0.5 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -0.1 +1.0 -0.3 +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin +0.2 +0.2 +0.5 -0.1 N.D.
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -0.2 +1.4 -0.2 +0.1 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted +0.2 +0.4 +0.3 +0.2 N.D.
cpg CPG +0.2 +0.4 +0.6 -0.0 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.5 +0.0 +0.4 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.1 +0.2 +0.7 +0.2 N.D.
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.2 +0.5 +0.4 +0.4 N.D.
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.5 +0.6 +1.0 -0.0 N.D.
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.6 +0.5 +0.7 +0.4 N.D.
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +0.1 +0.3 +1.4 +0.4 N.D.
carbon source D,L-Malic Acid (C) +0.2 +0.2 +2.1 -0.2 N.D.
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