Fitness for 5 genes in Ralstonia solanacearum GMI1000

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RS_RS10045	RS_RS10050	RS_RS10055	RS_RS10060	RS_RS10065
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	+0.1	-0.2	-4.2	-2.8	-6.9
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	-0.0	-0.1	-2.5	-3.0	-7.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.4	-0.3	-2.2	-2.3	-7.5
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	+0.6	+0.3	-2.5	-1.7	-7.1
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	+0.1	-0.1	-1.7	-2.6	-5.2
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-0.3	-0.1	-1.7	-1.9	-5.2
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	+0.7	+0.0	-1.3	-1.8	-5.2
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	+0.5	+0.4	-2.3	-1.6	-4.5
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	-0.2	-0.1	-2.0	-1.6	-2.9
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	-0.3	+0.3	-1.0	-1.6	-4.0
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	+0.7	-0.0	-1.3	-1.9	-3.3
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	+0.4	+0.1	-1.6	-1.4	-3.1
survival	water survival rep A; Treatment=watercosm; Collection=direct; Time=180_days	-0.0	-0.1	-1.0	-0.7	-3.5
carbon source	D-Glucose (C)	-3.0	-0.5	-0.0	-0.4	-0.4
carbon source	L-Glutamic (C)	-2.6	-0.5	+0.0	-0.7	-0.6
carbon source	L-Aspartic Acid (C)	-0.6	-0.0	-0.7	-1.3	-1.0
carbon source	pyruvate (C)	-3.2	-0.2	+0.2	+0.3	-0.7
survival	water survival rep B; Treatment=watercosm; Collection=direct; Time=180_days	+0.5	+0.3	-0.9	-0.5	-3.0
carbon source	D-Galactose (C)	-2.6	-0.4	+0.1	+0.2	-0.7
in planta	Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-3.6	-0.8	+0.4	+0.1	+0.6
stress	SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride	-1.3	+0.2	+0.6	-0.7	-0.7
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	+0.1	-0.2	-1.6	+0.6	+1.0
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	+0.4	-0.2	-1.7	+0.9	+1.4
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-1.0	-0.2	+0.3	+1.2	+1.1
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-0.5	-0.3	+0.6	+1.3	+1.0
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	+1.1	+0.5	-1.2	+0.7	+1.1
in planta	Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.2	-0.7	+0.9	+1.5	+1.4
in planta	Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.5	+0.8	+0.9	+0.5	+1.4
in planta	Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	+1.9	+1.4	-0.0	+0.2	+0.4
in planta	Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.3	+0.3	+1.0	+1.7	+1.3