Fitness for 5 genes in Ralstonia solanacearum GMI1000

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	RS_RS09810	RS_RS09815	RS_RS09820	RS_RS09825	RS_RS09830
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	+0.2	-0.4	-0.1	-0.7	-3.5
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-0.2	-0.0	-0.1	-0.7	-2.9
in planta	Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.2	-0.2	-0.0	-0.5	-3.0
carbon source	succinate (C)	+0.0	-0.2	+0.1	-1.8	-1.8
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-0.1	-0.3	-0.6	-0.9	-1.6
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	-0.0	-0.1	-0.5	-0.2	-2.7
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-0.2	-0.4	-0.1	-1.1	-1.6
carbon source	L-Glutamine (C)	+0.2	-0.5	-0.1	-0.9	-2.1
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-0.1	-0.5	-0.1	-1.5	-1.1
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	+0.0	+0.1	+0.4	+0.1	-3.7
in planta	Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted	-0.2	-0.1	-0.1	-0.4	-2.3
survival	water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-0.2	-0.1	-0.4	-0.4	-1.9
carbon source	Sucrose (C)	+0.1	-0.7	+0.4	-1.1	-1.4
carbon source	L-Aspartic Acid (C)	+0.2	-0.1	-0.1	-0.7	-2.1
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days	-0.1	+0.0	-0.1	+0.3	-2.8
xylem sap	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi	-0.3	+0.1	-0.0	+0.1	-2.4
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days	-0.3	-0.1	-0.0	+0.3	-2.5
carbon source	D-Glucose (C)	+0.1	-0.2	+0.1	+0.2	-2.7
carbon source	L-Glutamic (C)	+0.1	-0.3	+0.5	-0.2	-2.4
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted	-0.2	+0.0	+0.2	+0.4	-2.6
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days	+0.1	-0.3	+0.4	+0.2	-2.3
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days	+0.0	-0.1	+0.2	+0.2	-2.3
survival	water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days	-0.1	-0.3	+0.5	-0.1	-1.8
carbon source	L-Glutamic (C)	+0.3	-0.1	+0.1	-2.3	+0.5
carbon source	D-Glucose (C)	+0.1	-0.1	-0.1	-2.0	+0.6
survival	water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days	+0.1	-0.0	+0.1	+0.6	-2.2
in planta	Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems	-0.4	-0.0	+0.4	+0.5	-1.6
in planta	Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct	-0.0	-0.2	+1.1	-1.5	+0.5
in planta	Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi	+0.2	+0.0	-0.2	+1.3	-1.5
carbon source	D,L-Malic Acid (C)	-0.0	+0.1	+0.6	-1.4	+1.3