Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS07315 and RS_RS07320 are separated by 313 nucleotidesRS_RS07320 and RS_RS07325 are separated by 36 nucleotidesRS_RS07325 and RS_RS07330 are separated by 158 nucleotidesRS_RS07330 and RS_RS07335 are separated by 57 nucleotides RS_RS07315: RS_RS07315 - ABC-F family ATPase, at 1,554,140 to 1,555,762 _RS07315 RS_RS07320: RS_RS07320 - hypothetical protein, at 1,556,076 to 1,556,372 _RS07320 RS_RS07325: RS_RS07325 - hypothetical protein, at 1,556,409 to 1,556,963 _RS07325 RS_RS07330: RS_RS07330 - aldehyde dehydrogenase family protein, at 1,557,122 to 1,558,558 _RS07330 RS_RS07335: RS_RS07335 - DUF1289 domain-containing protein, at 1,558,616 to 1,558,891 _RS07335
Group Condition RS_RS07315 RS_RS07320 RS_RS07325 RS_RS07330 RS_RS07335
carbon source D-Glucose (C) -0.5 N.D. -2.6 +0.1 N.D.
carbon source Sucrose (C) -0.9 N.D. -1.5 -0.1 N.D.
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.5 N.D. -2.7 -0.2 N.D.
carbon source L-Aspartic Acid (C) -0.3 N.D. -1.9 -0.1 N.D.
carbon source L-Glutamine (C) -0.2 N.D. -2.0 +0.1 N.D.
carbon source L-Alanine (C) -0.2 N.D. -1.9 +0.0 N.D.
carbon source D-Galactose (C) -0.3 N.D. -1.5 -0.2 N.D.
carbon source L-Aspartic Acid (C) +0.3 N.D. -2.2 -0.0 N.D.
carbon source Sucrose (C) -1.6 N.D. +0.2 -0.2 N.D.
carbon source succinate (C) -0.4 N.D. -1.2 +0.2 N.D.
carbon source D-Glucose (C) -0.6 N.D. -0.8 -0.0 N.D.
carbon source D-Glucose (C) -0.9 N.D. -0.1 -0.2 N.D.
carbon source L-Aspartic Acid (C) -0.2 N.D. -0.4 -0.5 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin -0.0 N.D. -1.0 +0.0 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.1 N.D. -1.2 +0.4 N.D.
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.2 N.D. -0.9 -0.0 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -0.4 N.D. -0.6 +0.3 N.D.
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi +0.3 N.D. -0.6 -0.2 N.D.
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -0.1 N.D. -0.6 +0.4 N.D.
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -0.5 N.D. +0.4 -0.1 N.D.
carbon source D,L-Malic Acid (C) +0.2 N.D. -0.7 +0.5 N.D.
carbon source pyruvate (C) -0.5 N.D. +0.3 +0.3 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -0.5 N.D. +0.4 +0.2 N.D.
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -0.1 N.D. +0.6 -0.3 N.D.
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct +0.7 N.D. -0.4 +0.2 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.8 N.D. -0.4 +0.1 N.D.
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -0.2 N.D. +0.6 +0.3 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet +0.7 N.D. +0.4 -0.1 N.D.
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet +0.7 N.D. +0.3 +0.1 N.D.
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted +1.0 N.D. +2.0 +0.4 N.D.
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RS_RS07315
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RS_RS07320
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RS_RS07330
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