Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS07295 and RS_RS07300 are separated by 67 nucleotidesRS_RS07300 and RS_RS07305 are separated by 19 nucleotidesRS_RS07305 and RS_RS07310 overlap by 4 nucleotidesRS_RS07310 and RS_RS07315 are separated by 112 nucleotides RS_RS07295: RS_RS07295 - 7-carboxy-7-deazaguanine synthase, at 1,551,351 to 1,551,989 _RS07295 RS_RS07300: RS_RS07300 - 6-carboxytetrahydropterin synthase QueD, at 1,552,057 to 1,552,533 _RS07300 RS_RS07305: RS_RS07305 - tRNA adenosine(34) deaminase TadA, at 1,552,553 to 1,553,104 _RS07305 RS_RS07310: RS_RS07310 - muramoyltetrapeptide carboxypeptidase, at 1,553,101 to 1,554,027 _RS07310 RS_RS07315: RS_RS07315 - ABC-F family ATPase, at 1,554,140 to 1,555,762 _RS07315
Group Condition RS_RS07295 RS_RS07300 RS_RS07305 RS_RS07310 RS_RS07315
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -5.7 N.D. N.D. N.D. +0.0
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -5.1 N.D. N.D. N.D. -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -4.5 N.D. N.D. N.D. -0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -4.2 N.D. N.D. N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -4.2 N.D. N.D. N.D. +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -3.7 N.D. N.D. N.D. -0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.6 N.D. N.D. N.D. -0.1
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.5 N.D. N.D. N.D. -0.2
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=180_days -3.3 N.D. N.D. N.D. -0.3
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -3.5 N.D. N.D. N.D. -0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -3.4 N.D. N.D. N.D. -0.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days -3.2 N.D. N.D. N.D. -0.3
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -3.4 N.D. N.D. N.D. -0.0
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems -3.2 N.D. N.D. N.D. -0.1
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -3.3 N.D. N.D. N.D. -0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -2.6 N.D. N.D. N.D. -0.6
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.4 N.D. N.D. N.D. +0.2
survival water survival rep A; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days -2.6 N.D. N.D. N.D. -0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -3.0 N.D. N.D. N.D. +0.0
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -2.5 N.D. N.D. N.D. -0.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -2.2 N.D. N.D. N.D. -0.5
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days -2.4 N.D. N.D. N.D. -0.4
carbon source D-Glucose (C) -1.8 N.D. N.D. N.D. -0.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days -2.2 N.D. N.D. N.D. -0.4
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.0 N.D. N.D. N.D. +0.5
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi -2.5 N.D. N.D. N.D. +0.2
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.6 N.D. N.D. N.D. +0.5
m63_quarter_strength M63_quarter_strength -2.3 N.D. N.D. N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin_and_CrystalViolet -2.1 N.D. N.D. N.D. +0.7
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -2.0 N.D. N.D. N.D. +0.7
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