Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS06860 and RS_RS06865 are separated by 70 nucleotidesRS_RS06865 and RS_RS06870 are separated by 120 nucleotidesRS_RS06870 and RS_RS06875 are separated by 630 nucleotidesRS_RS06875 and RS_RS06880 are separated by 79 nucleotides RS_RS06860: RS_RS06860 - ribosomal-protein-alanine N-acetyltransferase, at 1,457,030 to 1,457,563 _RS06860 RS_RS06865: RS_RS06865 - uracil-DNA glycosylase, at 1,457,634 to 1,458,512 _RS06865 RS_RS06870: RS_RS06870 - lysophospholipid transporter LplT, at 1,458,633 to 1,459,949 _RS06870 RS_RS06875: RS_RS06875 - alanine racemase, at 1,460,580 to 1,461,707 _RS06875 RS_RS06880: RS_RS06880 - DNA repair protein RadA, at 1,461,787 to 1,463,157 _RS06880
Group Condition RS_RS06860 RS_RS06865 RS_RS06870 RS_RS06875 RS_RS06880
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. -7.7 N.D. -0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. -7.8 N.D. +0.4
in planta Plant=Tomato cv. C66A; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -4.3 N.D. -1.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. -6.2 N.D. +0.6
carbon source succinate (C) N.D. N.D. -3.1 N.D. -2.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -4.5 N.D. -0.4
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. -5.4 N.D. +0.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. -5.2 N.D. +0.4
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. -3.2 N.D. -1.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -4.3 N.D. -0.4
carbon source L-Glutamine (C) N.D. N.D. -2.2 N.D. -2.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. -4.4 N.D. -0.2
in planta Plant=Tomato_Hawaii; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -1.7 N.D. -2.9
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -4.2 N.D. -0.4
carbon source D-Glucose (C) N.D. N.D. -1.7 N.D. -2.8
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -4.0 N.D. -0.4
stress SMSA with Ralstonia_antibiotic_mix N.D. N.D. -2.3 N.D. -2.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -4.4 N.D. +0.1
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. -4.4 N.D. +0.1
carbon source pyruvate (C) N.D. N.D. -2.5 N.D. -1.7
stress SMSA with Ralstonia_antibiotic_mix_minus_Polymyxin N.D. N.D. -2.8 N.D. -1.4
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. -3.4 N.D. -0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -4.0 N.D. +0.1
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. -2.9 N.D. -1.0
stress SMSA with Ralstonia_antibiotic_mix_minus_Penicillin N.D. N.D. -3.1 N.D. -0.7
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -3.8 N.D. +0.2
in planta Plant=Tomato_C21O; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -4.1 N.D. +0.5
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted N.D. N.D. -3.9 N.D. +0.8
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. -3.0 N.D. +1.3
carbon source L-Aspartic Acid (C) N.D. N.D. -1.2 N.D. +3.1
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