Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS06650 and RS_RS06655 are separated by 90 nucleotidesRS_RS06655 and RS_RS06660 are separated by 31 nucleotidesRS_RS06660 and RS_RS06665 are separated by 5 nucleotidesRS_RS06665 and RS_RS06670 are separated by 79 nucleotides RS_RS06650: RS_RS06650 - pyridoxal phosphate-dependent aminotransferase, at 1,411,206 to 1,412,447 _RS06650 RS_RS06655: RS_RS06655 - homoserine dehydrogenase, at 1,412,538 to 1,413,857 _RS06655 RS_RS06660: RS_RS06660 - threonine synthase, at 1,413,889 to 1,415,334 _RS06660 RS_RS06665: RS_RS06665 - IclR family transcriptional regulator, at 1,415,340 to 1,415,957 _RS06665 RS_RS06670: RS_RS06670 - molybdopterin molybdenumtransferase MoeA, at 1,416,037 to 1,417,296 _RS06670
Group Condition RS_RS06650 RS_RS06655 RS_RS06660 RS_RS06665 RS_RS06670
carbon source pyruvate (C) -7.7 N.D. N.D. +0.4 -0.1
carbon source D-Glucose (C) -6.7 N.D. N.D. +0.2 -0.4
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -7.1 N.D. N.D. -0.5 +1.0
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -6.2 N.D. N.D. +0.0 +0.0
carbon source L-Glutamine (C) -5.3 N.D. N.D. -1.1 +0.5
carbon source L-Aspartic Acid (C) -5.0 N.D. N.D. -1.0 +0.2
carbon source L-Glutamic (C) -4.8 N.D. N.D. +0.3 -1.1
carbon source Sucrose (C) -6.3 N.D. N.D. +0.3 +0.4
carbon source L-Aspartic Acid (C) -3.8 N.D. N.D. -0.3 -1.4
carbon source D,L-Malic Acid (C) -4.7 N.D. N.D. -0.1 -0.6
carbon source L-Aspartic Acid (C) -5.4 N.D. N.D. -0.2 +0.3
carbon source D-Galactose (C) -5.4 N.D. N.D. +0.2 +0.2
carbon source pyruvate (C) -5.6 N.D. N.D. +0.4 +0.4
carbon source L-Glutamine (C) -4.5 N.D. N.D. -0.1 -0.1
carbon source succinate (C) -5.6 N.D. N.D. +0.4 +0.5
carbon source L-Glutamine (C) -3.4 N.D. N.D. -0.2 -1.0
carbon source D-Glucose (C) -5.3 N.D. N.D. +0.4 +0.3
carbon source D-Glucose (C) -5.7 N.D. N.D. +0.5 +0.6
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi -4.8 N.D. N.D. +0.3 -0.1
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted -2.0 N.D. N.D. -2.6 +0.3
carbon source D-Galactose (C) -4.7 N.D. N.D. +0.2 +0.2
m63_quarter_strength M63_quarter_strength -3.2 N.D. N.D. -0.1 -1.0
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct -3.0 N.D. N.D. -1.3 +0.3
carbon source Sucrose (C) -4.8 N.D. N.D. +0.6 +0.5
carbon source L-Glutamic (C) -4.6 N.D. N.D. +1.0 -0.0
carbon source L-Glutamic (C) -4.2 N.D. N.D. +0.7 +0.3
carbon source succinate (C) -4.6 N.D. N.D. +1.0 +0.6
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted -3.6 N.D. N.D. +0.3 +0.7
in planta Plant=Tomato_C27A; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.3 N.D. N.D. +0.3 +2.4
in planta Plant=Tomato_CU3; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted -2.2 N.D. N.D. +0.2 +2.5
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