Fitness for 5 genes in Ralstonia solanacearum GMI1000

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500 ntRS_RS06560 and RS_RS06565 are separated by 3 nucleotidesRS_RS06565 and RS_RS06570 are separated by 25 nucleotidesRS_RS06570 and RS_RS06575 are separated by 153 nucleotidesRS_RS06575 and RS_RS06580 are separated by 153 nucleotides RS_RS06560: RS_RS06560 - primosomal replication protein N, at 1,394,546 to 1,394,872 _RS06560 RS_RS06565: RS_RS06565 - 30S ribosomal protein S18, at 1,394,876 to 1,395,163 _RS06565 RS_RS06570: RS_RS06570 - 50S ribosomal protein L9, at 1,395,189 to 1,395,641 _RS06570 RS_RS06575: RS_RS06575 - replicative DNA helicase, at 1,395,795 to 1,397,186 _RS06575 RS_RS06580: RS_RS06580 - DUF47 domain-containing protein, at 1,397,340 to 1,397,966 _RS06580
Group Condition RS_RS06560 RS_RS06565 RS_RS06570 RS_RS06575 RS_RS06580
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Sap; Sample=Stem; Collection=Plant_fluid_from_centrifuged_stems N.D. N.D. N.D. N.D. -3.2
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. N.D. N.D. -2.9
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. N.D. N.D. -2.9
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. N.D. N.D. -2.6
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=7_days N.D. N.D. N.D. N.D. -2.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=30_days N.D. N.D. N.D. N.D. -2.2
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. N.D. N.D. -2.1
carbon source L-Aspartic Acid (C) N.D. N.D. N.D. N.D. -2.0
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. N.D. -1.9
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=1_days N.D. N.D. N.D. N.D. -1.9
carbon source L-Alanine (C) N.D. N.D. N.D. N.D. -1.8
survival water survival rep B; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. N.D. N.D. -1.8
in planta Plant=Tomato cv. Hawaii7996; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. N.D. N.D. -1.6
smsa no antibiotic control SMSA no antibiotic control N.D. N.D. N.D. N.D. -1.5
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. -1.5
in planta Plant=Bonny_Best_Tomato; Treatment=2dpi_Stem_Attached; Sample=Stem; Collection=Centrifuged_to_remove_stem_sap_homogenized_filtered_pelleted N.D. N.D. N.D. N.D. -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. N.D. -1.4
xylem sap Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=Xylem_sap; GrowthSubstrate=calcine_clay; Collection=direct; 1dpi N.D. N.D. N.D. N.D. -1.4
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=0_days N.D. N.D. N.D. N.D. -1.4
in planta Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=roots; Collection=Homogenized_filtered_pelleted N.D. N.D. N.D. N.D. -1.3
survival water survival rep C; Treatment=watercosm; Collection=outgrowth_in_CPG; Time=90_days N.D. N.D. N.D. N.D. -1.3
in planta Plant=Tomato cv. C21O; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. N.D. -1.1
in planta Plant=Tomato cv. Moneymaker; Treatment=None; Sample=xylem local; Collection=Direct; Time=4 dpi N.D. N.D. N.D. N.D. -1.1
carbon source L-Glutamine (C) N.D. N.D. N.D. N.D. -1.1
stress SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol N.D. N.D. N.D. N.D. -1.1
in planta Plant=Tomato cv. C42I; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. N.D. +1.2
in planta Plant=Tomato cv. H7996; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. N.D. +1.5
in planta Plant=Tomato cv. CU3; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. N.D. +1.6
stress SMSA with Ralstonia_antibiotic_mix_minus_CrystalViolet N.D. N.D. N.D. N.D. +1.8
in planta Plant=Tomato cv. C42L; PlantTreatment=None; Sample=xylem local total stem; GrowthSubstrate=calcine_clay; Collection=direct N.D. N.D. N.D. N.D. +1.8
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